Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   ACNR93_RS06865 Genome accession   NZ_CP184736
Coordinates   1394399..1395403 (-) Length   334 a.a.
NCBI ID   WP_021142864.1    Uniprot ID   -
Organism   Streptococcus equinus strain NM-2-29     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1389399..1400403
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNR93_RS06850 (ACNR93_06850) thrS 1389685..1391631 (-) 1947 WP_420543438.1 threonine--tRNA ligase -
  ACNR93_RS06855 (ACNR93_06855) - 1391982..1393316 (-) 1335 WP_420543439.1 glycosyltransferase family 4 protein -
  ACNR93_RS06860 (ACNR93_06860) - 1393318..1394316 (-) 999 WP_420543440.1 glycosyltransferase family 4 protein -
  ACNR93_RS06865 (ACNR93_06865) ccpA 1394399..1395403 (-) 1005 WP_021142864.1 catabolite control protein A Regulator
  ACNR93_RS06870 (ACNR93_06870) - 1395744..1396829 (+) 1086 WP_074479904.1 M24 family metallopeptidase -
  ACNR93_RS06875 (ACNR93_06875) - 1396863..1397189 (-) 327 WP_074668743.1 DMT family transporter -
  ACNR93_RS06880 (ACNR93_06880) - 1397301..1398191 (-) 891 WP_420543441.1 LysR family transcriptional regulator -
  ACNR93_RS06885 (ACNR93_06885) - 1398369..1399097 (+) 729 WP_004232843.1 DUF554 domain-containing protein -
  ACNR93_RS06890 (ACNR93_06890) - 1399279..1399713 (+) 435 WP_420543442.1 MarR family winged helix-turn-helix transcriptional regulator -
  ACNR93_RS06895 (ACNR93_06895) - 1399811..1400239 (+) 429 WP_420543443.1 MarR family winged helix-turn-helix transcriptional regulator -

Sequence


Protein


Download         Length: 334 a.a.        Molecular weight: 36727.77 Da        Isoelectric Point: 5.3038

>NTDB_id=1110960 ACNR93_RS06865 WP_021142864.1 1394399..1395403(-) (ccpA) [Streptococcus equinus strain NM-2-29]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILARGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPVVLAGTVDLEHQLPS
VNIDYKAAVADVVDILAKNNKDIAFVSGPLIDEINGKVRLAGYKEGLEKNNLSFKEGLVFEANYNYKDGYELAQRVMNSG
ATAAYVAEDELAAGLLNGLFAAGKKVPEDFEIITSNDSPITSYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
ILNHGLKLRGTSRQ

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=1110960 ACNR93_RS06865 WP_021142864.1 1394399..1395403(-) (ccpA) [Streptococcus equinus strain NM-2-29]
ATGAACACTGATGATACGATTACAATTTATGACGTTGCACGTGAAGCTGGCGTCTCAATGGCAACAGTTAGTCGTGTTGT
AAATGGTAATAAAAATGTAAAGGAAAACACTCGTAAAAAAGTCCTTGAAGTTATTGACCGTTTAGACTATCGTCCAAATG
CAGTTGCTCGTGGTTTGGCAAGTAAGAAAACGACAACTGTTGGTGTTGTTATTCCAAATATCGCTAATAGCTATTTCTCA
ATTTTAGCGAGAGGGATTGATGACATTGCTGCTATGTACAAATACAATATCGTTCTTGCATCAAGTGATGAAGATGACGA
TAAAGAAGTTAATGTCGTAAATACTTTGTTTGCTAAACAAGTAGATGGTATTATCTTCATGGGTCACCATTTGACTGAAA
AAATTCGTGCAGAGTTCTCTCGCTCACGCACACCAGTTGTTCTAGCAGGGACAGTTGATTTAGAACATCAACTTCCAAGT
GTTAATATTGATTACAAAGCTGCTGTAGCAGATGTTGTTGATATTTTAGCTAAAAACAATAAAGATATTGCCTTTGTTTC
AGGACCACTTATTGACGAAATCAATGGTAAAGTTCGTCTTGCTGGTTACAAAGAAGGACTTGAAAAGAACAATCTTTCAT
TCAAAGAAGGACTTGTATTTGAAGCAAACTATAACTACAAAGATGGTTATGAGCTTGCTCAACGTGTGATGAACTCAGGT
GCAACAGCTGCTTATGTAGCTGAAGATGAATTAGCTGCAGGTCTTTTGAACGGCTTGTTTGCTGCAGGTAAAAAAGTTCC
TGAAGACTTTGAAATCATTACAAGTAATGACTCACCAATTACTTCATACACACGTCCAAACCTCAGCTCAATCAGTCAAC
CGGTTTATGACCTTGGAGCTGTCAGCATGCGTATGTTGACTAAAATCATGAACAAAGAAGAACTTGAAGAAAAAGAAATC
ATTCTTAATCATGGTCTTAAATTACGTGGTACATCACGTCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

79.042

100

0.79

  ccpA Streptococcus pneumoniae D39

76.347

100

0.763

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

56.495

99.102

0.56


Multiple sequence alignment