Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACOBWA_RS12780 Genome accession   NZ_CP184640
Coordinates   2746601..2746978 (-) Length   125 a.a.
NCBI ID   WP_057761576.1    Uniprot ID   A0A7U6KS11
Organism   Psychrobacter sp. ER1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2741601..2751978
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACOBWA_RS12760 (ACOBWA_12770) - 2742892..2743824 (-) 933 WP_420229569.1 CheR family methyltransferase -
  ACOBWA_RS12765 (ACOBWA_12775) - 2743935..2745222 (-) 1288 Protein_2508 methyl-accepting chemotaxis protein -
  ACOBWA_RS12770 (ACOBWA_12780) - 2745525..2746055 (-) 531 WP_160022438.1 chemotaxis protein CheW -
  ACOBWA_RS12775 (ACOBWA_12785) - 2746059..2746421 (-) 363 WP_057761573.1 response regulator -
  ACOBWA_RS12780 (ACOBWA_12790) pilG 2746601..2746978 (-) 378 WP_057761576.1 twitching motility response regulator PilG Regulator
  ACOBWA_RS12785 (ACOBWA_12795) - 2747665..2748156 (+) 492 WP_420229570.1 hypothetical protein -
  ACOBWA_RS12790 (ACOBWA_12800) - 2748279..2748494 (+) 216 Protein_2513 HlyD family secretion protein -
  ACOBWA_RS12795 (ACOBWA_12805) - 2748525..2748884 (+) 360 WP_420229571.1 hypothetical protein -
  ACOBWA_RS12800 (ACOBWA_12810) - 2749144..2749866 (+) 723 WP_057761578.1 response regulator transcription factor -
  ACOBWA_RS12805 (ACOBWA_12815) - 2749952..2751189 (+) 1238 Protein_2516 HAMP domain-containing protein -

Sequence

Protein


Download         Length: 125 a.a.        Molecular weight: 14054.13 Da        Isoelectric Point: 4.5807

>NTDB_id=1110397 ACOBWA_RS12780 WP_057761576.1 2746601..2746978(-) (pilG) [Psychrobacter sp. ER1]
MENNFEGLKVMVIDDSKTIRRTAETLLQKAGCEVVTAIDGFDALAKIVDNNPDIIFVDIMMPRLDGYQTCALIKNNPDYA
NKPVIMLSSKDGLFDKARGRIVGSDEYLTKPFSKDELFDAINQYR

Nucleotide


Download         Length: 378 bp        

>NTDB_id=1110397 ACOBWA_RS12780 WP_057761576.1 2746601..2746978(-) (pilG) [Psychrobacter sp. ER1]
ATGGAAAATAATTTTGAAGGTTTAAAAGTAATGGTAATTGATGATTCAAAAACCATTCGCCGTACTGCAGAAACTTTATT
ACAAAAAGCGGGCTGTGAAGTAGTGACCGCTATCGATGGTTTTGATGCGTTAGCAAAGATTGTAGATAACAATCCAGATA
TTATTTTTGTCGACATTATGATGCCACGTCTAGATGGATATCAGACTTGTGCGCTGATAAAAAATAACCCTGATTATGCC
AATAAACCGGTAATCATGTTGTCATCTAAAGATGGTCTATTTGATAAGGCACGTGGTCGTATTGTGGGTTCTGATGAGTA
TCTGACTAAGCCATTTAGTAAAGATGAGCTTTTTGATGCCATTAATCAGTACCGTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U6KS11

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

78.226

99.2

0.776
  pilH Synechocystis sp. PCC 6803

41.228

91.2

0.376
  vicR Streptococcus mutans UA159

40.517

92.8

0.376

Multiple sequence alignment