Detailed information NTG0110902

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: ACKTSO_RS10980
• Genome accession: NZ_AP035889
• Coordinates: 2268258..2269460 (-)
• Length: 400 a.a.
• NCBI ID: WP_407902496.1
• Uniprot ID: -
• Organism: Gallibacterium anatis strain SMUHGa01
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	2267421..2268074	2268258..2269460	flank	184

Gene organization within MGE regions

Location: 2267421..2269460

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACKTSO_RS10975 (SMUG_21420)	-	2267421..2268074 (+)	654	WP_407902495.1	IS1595 family transposase	-
ACKTSO_RS10980 (SMUG_21430)	dprA	2268258..2269460 (-)	1203	WP_407902496.1	DNA-processing protein DprA	Machinery gene

Sequence

Protein

• Length: 400 a.a.
• Molecular weight: 43456.89 Da
• Isoelectric Point: 6.8808

>NTDB_id=110902 ACKTSO_RS10980 WP_407902496.1 2268258..2269460(-) (dprA) [Gallibacterium anatis strain SMUHGa01]
MQTVTTLLRLALLPQFGAIKIQQLLEQISLDTLLSYDRQTLSQIGWNAAQIQAWFSPPQAIIDTVLNWQQQAGNHILHYF
DHSYPLLLKQTRSAPPLLFVKGNIDVLSSPQIAMVGSRYCSPYGEHYAQTIAGELAHSGITINSGLALGIDGICHRAALD
NHGKTVAVLGSGLDQLYPARHKKLAQQILENNGALLSELFPDTPPIAENFPRRNRIISGLSFGTIVIEASQKSGSLITAR
LALEQNREVFAVPGALDNPLSQGCHHLIKQGAWLIENAQDVLEILTPQISSLMPFTPAIAAQTPTPTGNRSTAQNTIAIS
PQAKSGYTPPTINKKAVIKLDIPPQHQALMQQLNSATAISPDELSTALNRPIDQILTDLLELEMLGAVQQIQGGYIKNIV

Nucleotide

• Length: 1203 bp

>NTDB_id=110902 ACKTSO_RS10980 WP_407902496.1 2268258..2269460(-) (dprA) [Gallibacterium anatis strain SMUHGa01]
ATGCAAACAGTAACCACACTTTTACGTTTAGCCCTGCTGCCGCAATTCGGTGCTATCAAAATTCAACAACTGCTTGAACA
AATCTCGCTAGATACGCTGCTCAGCTACGATCGACAAACACTCAGCCAAATCGGTTGGAACGCTGCGCAAATTCAGGCTT
GGTTTTCACCGCCGCAAGCGATTATCGACACCGTTCTGAATTGGCAACAACAGGCAGGCAACCATATTCTGCACTATTTT
GATCACAGTTACCCGCTGTTGTTGAAACAAACTCGCTCCGCACCGCCATTGCTGTTTGTTAAAGGTAACATTGATGTGCT
CTCTTCGCCACAAATCGCTATGGTAGGCAGTCGCTATTGTTCACCTTATGGCGAACATTACGCCCAAACCATCGCCGGCG
AACTGGCACATAGCGGCATCACCATTAACAGCGGTTTAGCCTTAGGCATTGATGGCATTTGTCATCGTGCCGCTTTGGAT
AATCACGGCAAAACCGTTGCCGTTTTGGGCAGCGGCTTGGATCAACTTTATCCGGCTCGCCACAAAAAATTGGCACAACA
AATTCTGGAAAACAACGGTGCATTGCTGTCGGAACTGTTTCCCGACACGCCACCCATTGCCGAAAATTTTCCACGTCGCA
ACCGAATTATCAGCGGTCTCTCATTCGGCACCATCGTCATCGAAGCCTCGCAAAAAAGCGGTTCATTAATTACTGCACGT
CTGGCATTGGAACAAAATCGCGAAGTGTTCGCCGTTCCAGGTGCATTGGACAATCCATTGAGTCAAGGTTGCCATCACTT
AATCAAACAAGGGGCGTGGTTAATTGAAAATGCACAGGATGTGTTGGAAATTCTAACACCGCAAATTTCATCATTAATGC
CGTTTACACCAGCAATAGCAGCGCAAACACCAACGCCAACCGGCAATCGCTCTACTGCACAGAACACGATCGCAATATCG
CCACAAGCAAAATCCGGTTACACGCCGCCGACCATCAACAAAAAAGCGGTGATCAAACTTGATATTCCGCCACAACATCA
AGCATTAATGCAACAATTAAACAGTGCAACCGCGATTTCACCGGATGAACTTTCGACAGCATTAAATCGCCCTATCGATC
AAATTCTTACCGATCTATTGGAACTGGAAATGCTCGGTGCAGTGCAACAGATTCAAGGAGGTTATATTAAAAATATCGTC
TAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (70-276)

• DprA winged helix domain (DprA_WH) (344-394)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Glaesserella parasuis strain SC1401	48.99	99	0.485
dprA	Haemophilus influenzae Rd KW20	51.622	92.5	0.478
dprA	Vibrio campbellii strain DS40M4	43.622	98	0.427
dprA	Legionella pneumophila strain ERS1305867	38.308	100	0.385