Detailed information NTG1108426

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: ACN079_RS24085
• Genome accession: NZ_CP184478
• Coordinates: 5373336..5375582 (+)
• Length: 748 a.a.
• NCBI ID: WP_420232151.1
• Uniprot ID: -
• Organism: Pseudomonas sp. ABY48
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5368336..5380582

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACN079_RS24060 (ACN079_24060)	-	5369346..5370005 (+)	660	WP_420232146.1	transglutaminase-like domain-containing protein	-
ACN079_RS24065 (ACN079_24065)	-	5370050..5370673 (+)	624	WP_420232147.1	glutathione S-transferase family protein	-
ACN079_RS24070 (ACN079_24070)	-	5370810..5371742 (+)	933	WP_420232148.1	ABC transporter ATP-binding protein	-
ACN079_RS24075 (ACN079_24075)	-	5371745..5372524 (+)	780	WP_420232149.1	ABC transporter permease	-
ACN079_RS24080 (ACN079_24080)	-	5372676..5373191 (-)	516	WP_420232150.1	DUF2062 domain-containing protein	-
ACN079_RS24085 (ACN079_24085)	comA	5373336..5375582 (+)	2247	WP_420232151.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ACN079_RS24090 (ACN079_24090)	exbB	5375678..5376313 (+)	636	WP_420232152.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
ACN079_RS24095 (ACN079_24095)	-	5376310..5376738 (+)	429	WP_013694002.1	ExbD/TolR family protein	-
ACN079_RS24100 (ACN079_24100)	lpxK	5376738..5377748 (+)	1011	WP_420232153.1	tetraacyldisaccharide 4'-kinase	-
ACN079_RS24105 (ACN079_24105)	-	5377772..5377957 (+)	186	WP_003179363.1	Trm112 family protein	-
ACN079_RS24110 (ACN079_24110)	kdsB	5377954..5378718 (+)	765	WP_420232154.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ACN079_RS24115 (ACN079_24115)	-	5378718..5379182 (+)	465	WP_420232155.1	low molecular weight protein-tyrosine-phosphatase	-
ACN079_RS24120 (ACN079_24120)	murB	5379179..5380198 (+)	1020	WP_420232156.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 748 a.a.
• Molecular weight: 80931.01 Da
• Isoelectric Point: 9.3916

>NTDB_id=1108426 ACN079_RS24085 WP_420232151.1 5373336..5375582(+) (comA) [Pseudomonas sp. ABY48]
MRTGLVALALGLLAPSFLPALPPLWLIAAMPVLALMALPFRTYPLGFFLFGLAWACLSAQCALDDRLSIALDGETRWVEG
RVVGLPQQGDGVVRFELADAHSRRTRLPATMRLAWFGGPPINSGERWRLAVKLKRPTGLLNPHGFDYAAWLLSRGIGATG
TIKDGHLLQAARGAWRDEVRQALAQVDAHGRSGALAALVLGDGGGLSREDWQVLQDTGTVHLLVISGQHIGLLAGLVYLL
VAGAARYGLWPVGLAWLPWACALAFCAALGYGLLAGFEVPVRRACAMIGLVLLWRLRFKQPDPWWAWLLAFVGVLVFDPL
ASLRPGFWLSFAAVAILMFTFGARLGPWRWWQTWTRAQWLVALGLCPLLLIVGLPVSLSGPLVNLLAVPWISLLVLPPAL
LGTALLPVPLMGEGLLWVAGGLLDLLFRGLTLVAGRMPAWVPAAVPPWALGIAAFGAFLLLLPNGVPLRVLGWPMVLLMV
FPPQEHLPQGHAEIWQLDVGQGLAVLVRTRRHTLLYDAGPRFGEADAGERVVLPTLRKLGVRGVDLMLLSHADADHAGGA
RAVRNGLPTLEVISGDPDALPAELLAGPCDSGRRWEWDGVGFELWRWASAVESNQKSCVLLVEAGGERLLLTGDIDIPAE
RALLDEALALPIQWLAAPHHGSRSSSSMALLSRLKPHSVLISRGHGNAFGHPHPQVMARYRRSGLAVYDSAEQGAIRLQL
GAFEVPRTEAGRRRYWRDPPAVGPPGQY

Nucleotide

• Length: 2247 bp

>NTDB_id=1108426 ACN079_RS24085 WP_420232151.1 5373336..5375582(+) (comA) [Pseudomonas sp. ABY48]
ATGCGCACAGGATTAGTCGCGCTTGCACTGGGGCTGTTGGCCCCGAGTTTTTTACCGGCACTGCCGCCGCTGTGGCTGAT
TGCAGCCATGCCGGTGCTGGCGCTGATGGCGTTGCCGTTTCGAACCTACCCGCTGGGTTTTTTCCTGTTCGGGCTGGCCT
GGGCCTGCCTGTCGGCGCAGTGTGCGCTGGACGATCGGTTATCCATCGCGCTCGACGGTGAAACCCGCTGGGTCGAGGGG
CGCGTCGTCGGTTTGCCGCAACAGGGCGATGGCGTGGTGCGCTTCGAACTGGCCGATGCCCACTCACGCCGTACCCGGCT
ACCGGCGACGATGCGCCTCGCCTGGTTCGGTGGGCCACCCATCAACAGCGGCGAACGCTGGCGATTGGCAGTGAAGCTCA
AACGGCCCACCGGGCTGCTGAACCCGCACGGCTTCGACTATGCGGCCTGGTTGCTGAGCCGCGGCATCGGCGCGACCGGG
ACGATCAAGGACGGTCACCTCCTGCAAGCGGCACGGGGCGCCTGGCGCGACGAGGTGCGCCAGGCGCTGGCACAGGTCGA
CGCCCACGGCCGCTCCGGTGCGCTGGCGGCACTGGTCCTGGGCGACGGCGGCGGGCTGAGCCGCGAGGATTGGCAGGTGC
TGCAAGACACTGGCACCGTCCACTTGCTGGTGATTTCCGGGCAACACATCGGCCTGCTCGCCGGCTTGGTGTATCTGTTG
GTGGCCGGTGCGGCGCGTTATGGCCTGTGGCCGGTGGGGCTGGCGTGGTTGCCTTGGGCCTGTGCGTTGGCCTTTTGCGC
CGCCCTGGGCTACGGCTTGCTCGCCGGTTTCGAGGTGCCGGTGCGCCGGGCCTGCGCGATGATCGGCCTGGTGTTGCTGT
GGCGCTTGCGCTTCAAACAGCCAGATCCGTGGTGGGCATGGCTGCTGGCCTTCGTCGGGGTGCTGGTGTTCGACCCGCTT
GCCAGCTTGCGGCCGGGGTTCTGGTTGTCGTTTGCGGCCGTCGCCATCTTGATGTTCACCTTTGGCGCTCGCCTGGGGCC
CTGGCGCTGGTGGCAAACCTGGACCCGTGCCCAGTGGCTGGTTGCGCTCGGCCTGTGTCCGTTGTTGTTGATCGTGGGCT
TGCCGGTCAGCCTCAGCGGGCCGTTGGTGAACCTGCTTGCGGTGCCCTGGATCAGCCTGTTGGTCTTGCCGCCCGCGCTG
CTTGGCACGGCGTTGTTGCCGGTGCCGCTCATGGGTGAAGGCTTGCTGTGGGTTGCCGGCGGGCTGCTCGATCTGCTGTT
CAGGGGGCTGACGCTGGTTGCCGGACGAATGCCAGCCTGGGTTCCTGCTGCGGTTCCGCCCTGGGCCTTGGGTATCGCCG
CCTTTGGTGCTTTTTTGCTGCTGTTGCCCAACGGTGTGCCGCTACGTGTGCTGGGGTGGCCAATGGTGTTGCTGATGGTG
TTTCCACCGCAAGAACACCTGCCCCAAGGGCACGCCGAGATCTGGCAACTGGACGTGGGCCAAGGGCTGGCGGTGCTGGT
GCGGACCCGGCGGCACACTCTGCTTTACGACGCCGGGCCGCGCTTTGGCGAGGCCGATGCGGGCGAACGCGTGGTACTGC
CGACCTTGCGCAAACTGGGTGTGCGCGGCGTGGACCTGATGCTGCTCAGCCATGCCGACGCCGATCACGCCGGCGGTGCC
CGCGCCGTGCGTAATGGGCTGCCGACGCTGGAAGTGATCAGCGGCGATCCCGACGCGCTGCCCGCCGAGCTGCTGGCCGG
GCCGTGCGACAGTGGCAGGCGCTGGGAATGGGACGGCGTCGGGTTCGAGCTGTGGCGGTGGGCCTCTGCCGTCGAGAGCA
ACCAGAAGTCCTGCGTGTTGCTGGTCGAGGCTGGTGGTGAACGCCTGCTGCTGACCGGCGATATCGACATCCCTGCCGAG
CGTGCCTTGCTCGACGAGGCCCTGGCGTTACCGATCCAGTGGCTGGCCGCGCCGCATCACGGCAGCCGCAGTTCGTCGTC
GATGGCGTTGCTGTCACGTCTCAAGCCACATTCGGTATTGATCTCCCGAGGGCACGGCAACGCGTTCGGCCATCCTCATC
CCCAGGTGATGGCCCGGTATCGACGTTCGGGCCTGGCGGTCTACGACAGCGCCGAGCAGGGCGCCATTCGTCTGCAACTC
GGGGCTTTCGAGGTGCCGCGCACCGAGGCTGGGCGCCGCCGCTACTGGCGCGATCCGCCAGCCGTCGGGCCACCGGGGCA
ATATTGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (198-463)

• Domain of unknown function (DUF4131) (DUF4131) (22-165)

• Metallo-beta-lactamase superfamily (Lactamase_B) (498-685)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	60.894	95.722	0.583
comA	Ralstonia pseudosolanacearum GMI1000	31.877	100	0.361