Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACLKMZ_RS11885 Genome accession   NZ_CP183909
Coordinates   2445508..2445891 (-) Length   127 a.a.
NCBI ID   WP_004723803.1    Uniprot ID   A0A077L426
Organism   Acinetobacter gandensis strain M1_NDM_tet(X3)     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2440508..2450891
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLKMZ_RS11870 - 2442452..2444527 (-) 2076 WP_067764556.1 methyl-accepting chemotaxis protein -
  ACLKMZ_RS11875 - 2444572..2445108 (-) 537 WP_067764559.1 chemotaxis protein CheW -
  ACLKMZ_RS11880 - 2445115..2445483 (-) 369 WP_067764563.1 response regulator -
  ACLKMZ_RS11885 pilG 2445508..2445891 (-) 384 WP_004723803.1 twitching motility response regulator PilG Regulator
  ACLKMZ_RS11890 - 2446241..2446828 (+) 588 WP_373685038.1 hypothetical protein -
  ACLKMZ_RS11895 - 2446878..2447981 (+) 1104 WP_067764569.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14227.30 Da        Isoelectric Point: 4.7172

>NTDB_id=1107174 ACLKMZ_RS11885 WP_004723803.1 2445508..2445891(-) (pilG) [Acinetobacter gandensis strain M1_NDM_tet(X3)]
MDDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVVTAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVTA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=1107174 ACLKMZ_RS11885 WP_004723803.1 2445508..2445891(-) (pilG) [Acinetobacter gandensis strain M1_NDM_tet(X3)]
ATGGACGATAAATTCCAAAATCTAAAAGTCATGGTCATTGACGATTCAAAAACCATCCGTCGTACAGCCGAAACACTTCT
TCAGCGTGAAGGTTGTGAGGTGGTTACAGCCGTTGACGGTTTTGAAGCACTTTCAAAAATTGCAGAAGCAAATCCAGATA
TTGTATTTGTCGATATTATGATGCCGCGTCTTGATGGCTATCAAACTTGCGCATTAATCAAAAATTCACAAAATTATCAA
AATATTCCAGTCATTATGCTTTCAAGTAAAGACGGTCTTTTTGATCAAGCAAAAGGCCGTGTTGTGGGTTCGGATGAATA
TTTAACAAAACCATTCAGTAAAGATGAATTACTGAATGCAATCCGTAACCACGTAACAGCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A077L426

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

96.063

100

0.961
  vicR Streptococcus mutans UA159

41.88

92.126

0.386
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment