Detailed information NTG1107165

Bioinformatically predicted

Overview

• Name: crp
• Type: Regulator
• Locus tag: ACLKMZ_RS05930
• Genome accession: NZ_CP183909
• Coordinates: 1234527..1235237 (+)
• Length: 236 a.a.
• NCBI ID: WP_067762263.1
• Uniprot ID: -
• Organism: Acinetobacter gandensis strain M1_NDM_tet(X3)
• Function: regulate competence development (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	1232738..1233607	1234527..1235237	flank	920

Gene organization within MGE regions

Location: 1232738..1235237

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLKMZ_RS05920	-	1232738..1233670 (-)	933	WP_317090520.1	IS5-like element ISAba12 family transposase	-
ACLKMZ_RS05925	-	1233951..1234379 (-)	429	WP_180058919.1	OsmC family protein	-
ACLKMZ_RS05930	crp	1234527..1235237 (+)	711	WP_067762263.1	cAMP-activated global transcriptional regulator CRP	Regulator

Sequence

Protein

• Length: 236 a.a.
• Molecular weight: 26581.24 Da
• Isoelectric Point: 4.6788

>NTDB_id=1107165 ACLKMZ_RS05930 WP_067762263.1 1234527..1235237(+) (crp) [Acinetobacter gandensis strain M1_NDM_tet(X3)]
MTSNFSQLSTDALSPGQLPESVKALLKRAYINRYPKRTTIVDAGSESKSLYLILKGSVSIILREDDEREIVVAYLNAGDF
FGEMGLFEANAQRTAEVRTRDVCEIAEITYENFHELSKQYPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEEQGMIETDGKAILIFDASLEEKSQLATDDFEDEE

Nucleotide

• Length: 711 bp

>NTDB_id=1107165 ACLKMZ_RS05930 WP_067762263.1 1234527..1235237(+) (crp) [Acinetobacter gandensis strain M1_NDM_tet(X3)]
ATGACTTCAAACTTTTCACAACTTAGCACAGATGCACTATCTCCGGGGCAGTTACCTGAGTCGGTGAAGGCATTATTAAA
ACGTGCATATATTAATCGTTACCCAAAACGTACCACTATCGTTGATGCGGGTTCAGAATCTAAATCTTTGTATTTAATTC
TTAAGGGCTCTGTATCTATTATTTTACGCGAAGATGATGAGCGTGAAATTGTTGTGGCATATTTAAATGCGGGTGACTTT
TTTGGGGAAATGGGTCTATTTGAAGCAAATGCACAACGTACTGCGGAAGTTCGTACGCGTGATGTATGTGAAATTGCTGA
AATTACCTATGAAAATTTTCATGAATTAAGTAAACAATATCCAGACTTGAGTTATGCAGTATTTGCTCAACTTGTACGTC
GTCTTAAAAACACGACTCGCAAAGTGACAGATCTTGCATTTATAGATGTATCTGGTCGTATTGCACGTTGCTTAATTGAC
TTATCATCTCAGCCAGAAGCAATGATTTTGCCAAATGGTCGCCAGATTCGTATTACTCGTCAAGAGATTGGCCGTATCGT
GGGTTGTTCCCGTGAAATGGTGGGCCGTGTTCTTAAGACACTTGAAGAGCAAGGCATGATCGAAACTGATGGTAAGGCGA
TTCTTATTTTTGATGCATCGCTAGAAGAAAAAAGTCAGTTGGCAACAGATGACTTTGAAGACGAAGAATAA

Domains

Predicted by InterproScan.

• Cyclic nucleotide-binding domain (cNMP_binding) (33-120)

• Bacterial regulatory proteins, crp family (Crp) (176-207)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
crp	Acinetobacter baumannii D1279779	91.102	100	0.911
crp	Vibrio cholerae strain A1552	47.317	86.864	0.411
crp	Haemophilus influenzae Rd KW20	48.205	82.627	0.398