Detailed information NTG1107142

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ACLKM0_RS12680
• Genome accession: NZ_CP183907
• Coordinates: 2632167..2633522 (+)
• Length: 451 a.a.
• NCBI ID: WP_171526345.1
• Uniprot ID: -
• Organism: Acinetobacter indicus strain M3_NDM
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 2627167..2638522

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLKM0_RS12660	thrC	2627339..2628484 (+)	1146	WP_152342164.1	threonine synthase	-
ACLKM0_RS12665	-	2628577..2629659 (-)	1083	WP_127799456.1	serine hydrolase	-
ACLKM0_RS12670	-	2629877..2630512 (+)	636	WP_005181577.1	response regulator	-
ACLKM0_RS12675	pilS	2630527..2632095 (+)	1569	WP_104489117.1	sensor histidine kinase	Regulator
ACLKM0_RS12680	pilR	2632167..2633522 (+)	1356	WP_171526345.1	sigma-54-dependent transcriptional regulator	Regulator
ACLKM0_RS12685	-	2633539..2634708 (-)	1170	WP_005181572.1	S41 family peptidase	-
ACLKM0_RS12690	gpmI	2634732..2636279 (-)	1548	WP_005181570.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
ACLKM0_RS12695	lptG	2636398..2637468 (-)	1071	WP_411689030.1	LPS export ABC transporter permease LptG	-

Sequence

Protein

• Length: 451 a.a.
• Molecular weight: 50603.31 Da
• Isoelectric Point: 6.7145

>NTDB_id=1107142 ACLKM0_RS12680 WP_171526345.1 2632167..2633522(+) (pilR) [Acinetobacter indicus strain M3_NDM]
MQMTLARMGIQTHVAHRLEQARQLLSSHHYDACITDLNLPDGNGLQLVELIAQHFPQLPVAVLTAYGNMEIAIAALKAGA
FDFVSKPINQKHLEQLLEKALNQPLFKAHSQEADQLEQRMLIGQSLPIQQLRTTLKKIARSQAPVFISGESGTGKEVVAN
LVHRLSNRSDGPFIAINCGAIPGDLMESEFFGHKKGSFTGAAQDKQGLIQSAHGGSLFLDEIAELPLNMQVKLLRAVQEK
RIRPVGSDTEIDVDFRIISASHQDLEALVQQGRFRQDLFFRIHVMDIVLPPLRERGQDILLLAQHFIQKIAQEWDIHSKT
LSERAQQFLLEQYYPGNVRELRNIIERAMTLSDDDVIDLPHLQTAPLRKMAPLAEPEADPATPVTADALPAAPRKLPEEG
LELFLEKIEKEILLNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDTDE

Nucleotide

• Length: 1356 bp

>NTDB_id=1107142 ACLKM0_RS12680 WP_171526345.1 2632167..2633522(+) (pilR) [Acinetobacter indicus strain M3_NDM]
ATGCAAATGACATTGGCGCGCATGGGGATTCAAACACACGTGGCACACCGGCTGGAGCAGGCACGCCAGTTACTGTCCAG
TCATCACTATGATGCCTGCATCACCGATCTGAATTTACCTGATGGCAATGGCCTGCAACTGGTCGAGCTGATTGCCCAGC
ATTTTCCGCAGCTGCCGGTTGCGGTGCTGACGGCCTATGGCAATATGGAAATTGCCATTGCCGCGCTCAAAGCCGGAGCC
TTTGATTTTGTCAGCAAACCGATTAACCAGAAACACCTCGAACAATTACTGGAAAAAGCACTGAATCAGCCGCTGTTTAA
AGCACATAGTCAGGAAGCAGACCAGCTGGAACAGCGGATGCTGATCGGGCAATCTCTACCGATTCAGCAACTGCGCACCA
CCCTGAAAAAAATTGCCCGCTCGCAGGCACCGGTGTTTATTAGCGGTGAATCAGGCACCGGGAAAGAAGTAGTGGCCAAT
CTGGTGCATCGCCTCAGCAACCGCAGTGACGGGCCTTTTATTGCCATCAACTGTGGCGCGATTCCGGGCGATTTGATGGA
AAGCGAATTCTTCGGCCATAAAAAAGGCAGCTTTACCGGTGCAGCGCAGGACAAACAGGGCCTGATTCAGTCAGCACACG
GCGGTAGCCTGTTTCTGGATGAAATTGCCGAACTGCCGCTCAATATGCAGGTAAAACTGCTGCGCGCGGTGCAGGAAAAA
CGGATTCGTCCGGTCGGTTCCGATACGGAAATTGATGTTGATTTCCGGATTATTAGTGCCAGCCATCAGGACCTGGAAGC
GTTAGTCCAGCAAGGCCGGTTCCGTCAGGATCTGTTCTTCCGGATTCATGTGATGGATATTGTGTTGCCACCGCTACGTG
AGCGTGGTCAGGATATTTTATTGCTGGCCCAGCATTTTATTCAGAAAATTGCCCAGGAATGGGATATACACAGCAAAACC
CTGTCAGAACGTGCCCAGCAGTTTTTGCTGGAACAGTATTATCCGGGTAATGTGCGTGAGCTACGCAATATCATTGAACG
CGCCATGACCTTGAGTGATGATGATGTGATTGATCTGCCACATCTGCAGACCGCACCCTTACGCAAAATGGCACCGCTGG
CCGAGCCAGAAGCTGACCCGGCAACACCGGTTACAGCTGATGCCCTGCCCGCTGCTCCGCGTAAACTGCCGGAAGAAGGA
CTGGAGCTGTTTCTGGAGAAAATCGAAAAAGAGATTTTGCTGAATGCACTGAATCTGACCCATTGGAACCGGACCCTGGC
TGCGAAAAAACTGGGGATGTCGTTTCGTTCCCTGCGTTATCGACTGAAGAAATTCGGACTGGATACCGATGAATAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (3-97)

• Sigma-54 interaction domain (Sigma54_activat) (121-287)

• Bacterial regulatory protein, Fis family (HTH_8) (404-445)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	74.058	100	0.741
pilR	Pseudomonas aeruginosa PAK	50.334	99.557	0.501