Detailed information NTG1107104

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ACLKM1_RS12300
• Genome accession: NZ_CP183903
• Coordinates: 2564023..2565447 (+)
• Length: 474 a.a.
• NCBI ID: WP_005094453.1
• Uniprot ID: -
• Organism: Acinetobacter pseudolwoffii strain M5_NDM
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 2559023..2570447

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLKM1_RS12280	thrC	2559303..2560442 (+)	1140	WP_005094446.1	threonine synthase	-
ACLKM1_RS12285	-	2560497..2561564 (-)	1068	WP_141667085.1	serine hydrolase	-
ACLKM1_RS12290	-	2561784..2562419 (+)	636	WP_005108454.1	response regulator	-
ACLKM1_RS12295	pilS	2562442..2564007 (+)	1566	WP_411689660.1	sensor histidine kinase	Regulator
ACLKM1_RS12300	pilR	2564023..2565447 (+)	1425	WP_005094453.1	sigma-54-dependent transcriptional regulator	Regulator
ACLKM1_RS12305	-	2565448..2566620 (-)	1173	WP_005169022.1	S41 family peptidase	-
ACLKM1_RS12310	gpmI	2566652..2568199 (-)	1548	WP_005169025.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
ACLKM1_RS12315	lptG	2568324..2569394 (-)	1071	WP_411689659.1	LPS export ABC transporter permease LptG	-

Sequence

Protein

• Length: 474 a.a.
• Molecular weight: 53577.74 Da
• Isoelectric Point: 5.9765

>NTDB_id=1107104 ACLKM1_RS12300 WP_005094453.1 2564023..2565447(+) (pilR) [Acinetobacter pseudolwoffii strain M5_NDM]
MSVEQQPLVLLVDDEEDLCTLMQMSLLRMGIRTHIAHCLQDAKKCLADHQYDACLTDLNLPDGNGLELLEWIGHLYPALP
VAVLTAYGNMEIAIAALKAGAFDFVSKPINQKHLEQLLQKALNKPVDYSHNNPNDALEHKMLIGQSIPIQHLRITLQKIA
RSQAPVFITGESGTGKEVVANLVHRLSNRNEGPFIAINCGAIPTELMESELFGHKKGSFTGAAQDKQGLIQSAHGGSLFL
DEIAELPLSMQVKLLRAVQEKRIRPLGSDTEIDVDFRVISATHQDLEALVQQGKFRQDLYFRIHVMDLTLPPLRERSQDI
LLLAEHFIQKICQEWGIANKKLTERSKEFLLEQYYPGNVRELRNIMERAITLSDEERIDLQHLQSAPLRQALNSAQEMNT
LTSEIIATDTLIAPRKLPEEGLELYLEKIEKEVLLNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDTEEDE

Nucleotide

• Length: 1425 bp

>NTDB_id=1107104 ACLKM1_RS12300 WP_005094453.1 2564023..2565447(+) (pilR) [Acinetobacter pseudolwoffii strain M5_NDM]
ATGAGTGTGGAACAACAGCCACTGGTGCTCTTGGTGGATGATGAAGAAGATTTATGCACCCTCATGCAAATGTCGTTGCT
GCGGATGGGGATTCGTACGCACATCGCACATTGTCTGCAAGATGCTAAAAAATGTCTTGCAGATCATCAATATGATGCCT
GTTTAACTGACCTGAACTTGCCCGATGGCAATGGTTTGGAGTTACTGGAGTGGATTGGCCATCTCTACCCTGCACTTCCG
GTCGCGGTTCTGACCGCCTATGGCAACATGGAAATCGCGATTGCTGCACTCAAGGCCGGTGCCTTTGACTTTGTCAGCAA
ACCGATCAATCAGAAACATCTGGAACAACTGCTACAAAAAGCACTGAATAAACCGGTGGATTATTCCCATAATAATCCAA
ATGATGCTTTAGAACATAAAATGCTGATTGGGCAATCGATACCGATTCAGCACTTACGTATTACCTTACAAAAAATTGCC
CGCTCACAGGCACCGGTTTTTATTACTGGTGAATCGGGAACTGGCAAGGAAGTGGTGGCCAATCTGGTCCATCGCCTGAG
CAACCGTAATGAAGGCCCATTTATTGCAATTAACTGTGGTGCGATTCCCACTGAACTGATGGAAAGCGAACTGTTTGGGC
ATAAGAAAGGCAGCTTTACTGGCGCCGCTCAGGACAAACAGGGGCTGATTCAATCGGCACATGGCGGCAGCCTGTTTCTG
GATGAAATTGCCGAATTACCACTTTCCATGCAGGTCAAACTGTTACGTGCCGTACAGGAAAAACGTATTCGTCCCCTCGG
TTCAGATACTGAAATTGATGTGGATTTCCGCGTCATCAGTGCCACTCATCAGGATCTGGAAGCCTTGGTACAACAAGGCA
AATTCCGTCAGGATTTATATTTCCGTATTCATGTGATGGATCTGACTTTACCGCCGCTGCGTGAACGGAGTCAGGATATT
CTCTTACTCGCCGAACATTTTATTCAGAAGATTTGCCAGGAATGGGGCATTGCCAATAAAAAACTGACAGAACGCAGTAA
AGAATTTTTATTGGAACAATATTATCCGGGTAATGTACGTGAATTGCGTAATATTATGGAACGTGCAATTACCTTGAGTG
ATGAAGAGCGGATTGATCTTCAGCATCTGCAAAGTGCACCGTTACGTCAGGCTCTTAATAGCGCTCAGGAGATGAATACG
CTCACGAGCGAGATTATTGCGACTGACACCCTGATTGCCCCGAGAAAGCTCCCAGAAGAAGGCCTAGAGCTATATTTAGA
AAAGATTGAAAAAGAAGTTCTACTCAATGCGCTGAATCTAACGCACTGGAACCGCACACTGGCCGCGAAAAAGCTCGGTA
TGTCATTCCGCTCCCTACGCTATCGTTTGAAAAAGTTCGGACTGGATACTGAGGAAGACGAATAA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (426-466)

• Response regulator receiver domain (Response_reg) (9-118)

• Sigma-54 interaction domain (Sigma54_activat) (142-308)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	72.939	99.789	0.728
pilR	Pseudomonas aeruginosa PAK	49.241	97.257	0.479