Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACLKM1_RS09960 Genome accession   NZ_CP183903
Coordinates   2099026..2099409 (-) Length   127 a.a.
NCBI ID   WP_005097851.1    Uniprot ID   N9MAE5
Organism   Acinetobacter pseudolwoffii strain M5_NDM     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2094026..2104409
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLKM1_RS09945 - 2095968..2098040 (-) 2073 WP_280560621.1 methyl-accepting chemotaxis protein -
  ACLKM1_RS09950 - 2098087..2098623 (-) 537 WP_005097846.1 chemotaxis protein CheW -
  ACLKM1_RS09955 - 2098629..2098997 (-) 369 WP_005097847.1 response regulator -
  ACLKM1_RS09960 pilG 2099026..2099409 (-) 384 WP_005097851.1 twitching motility response regulator PilG Regulator
  ACLKM1_RS09965 - 2099697..2100344 (+) 648 WP_180049570.1 hypothetical protein -
  ACLKM1_RS09970 - 2100396..2101523 (+) 1128 WP_411689402.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14301.36 Da        Isoelectric Point: 4.7172

>NTDB_id=1107090 ACLKM1_RS09960 WP_005097851.1 2099026..2099409(-) (pilG) [Acinetobacter pseudolwoffii strain M5_NDM]
MDDKFQNLKVMVIDDSKTIRRTAETLLQREGYEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHISA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=1107090 ACLKM1_RS09960 WP_005097851.1 2099026..2099409(-) (pilG) [Acinetobacter pseudolwoffii strain M5_NDM]
ATGGACGATAAATTCCAAAATCTAAAAGTTATGGTTATTGATGACTCAAAGACCATTCGTCGTACCGCGGAAACTCTTCT
TCAGCGCGAAGGTTATGAAGTGATTACTGCCGTCGACGGATTTGAAGCTTTGTCAAAAATTGCCGAAGCAAATCCAGATA
TCGTGTTTGTAGACATCATGATGCCGCGTCTAGATGGCTATCAAACTTGCGCGTTAATTAAAAATTCTCAGAATTACCAG
AATATTCCTGTGATTATGCTATCAAGTAAAGATGGTTTATTTGATCAGGCCAAAGGTCGTGTTGTGGGTTCAGATGAATA
CCTGACCAAACCTTTTAGTAAAGATGAATTGCTGAACGCAATCCGTAACCATATTAGTGCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB N9MAE5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

96.063

100

0.961
  vicR Streptococcus mutans UA159

44.444

92.126

0.409
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment