Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   ACLKM1_RS09940 Genome accession   NZ_CP183903
Coordinates   2091354..2095799 (-) Length   1481 a.a.
NCBI ID   WP_280560620.1    Uniprot ID   -
Organism   Acinetobacter pseudolwoffii strain M5_NDM     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 2086354..2100799
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLKM1_RS09910 elsL 2087352..2087885 (-) 534 WP_005097834.1 cell wall-recycling L,D-carboxypeptidase ElsL -
  ACLKM1_RS09915 - 2087882..2088340 (-) 459 WP_005169714.1 YbaN family protein -
  ACLKM1_RS09920 - 2088428..2089303 (+) 876 WP_180001656.1 DUF1853 family protein -
  ACLKM1_RS09925 - 2089416..2089568 (+) 153 WP_004280704.1 entericidin A/B family lipoprotein -
  ACLKM1_RS09930 dapE 2089690..2090826 (+) 1137 WP_159138274.1 succinyl-diaminopimelate desuccinylase -
  ACLKM1_RS09935 - 2090892..2091350 (-) 459 WP_005169706.1 hypothetical protein -
  ACLKM1_RS09940 chpA 2091354..2095799 (-) 4446 WP_280560620.1 Hpt domain-containing protein Regulator
  ACLKM1_RS09945 - 2095968..2098040 (-) 2073 WP_280560621.1 methyl-accepting chemotaxis protein -
  ACLKM1_RS09950 - 2098087..2098623 (-) 537 WP_005097846.1 chemotaxis protein CheW -
  ACLKM1_RS09955 - 2098629..2098997 (-) 369 WP_005097847.1 response regulator -
  ACLKM1_RS09960 pilG 2099026..2099409 (-) 384 WP_005097851.1 twitching motility response regulator PilG Regulator
  ACLKM1_RS09965 - 2099697..2100344 (+) 648 WP_180049570.1 hypothetical protein -

Sequence


Protein


Download         Length: 1481 a.a.        Molecular weight: 165493.51 Da        Isoelectric Point: 4.3397

>NTDB_id=1107089 ACLKM1_RS09940 WP_280560620.1 2091354..2095799(-) (chpA) [Acinetobacter pseudolwoffii strain M5_NDM]
MKEILKNLVETTTLPEDSYLDQDAEILEIFVEEIEEIFVELNALFPEWLVNPDHQENLKTIRRHFHTLKGSGRMVGAKSA
GEMAWAVEDTLNRVLSGSIQLTAMVQKFAQAVLNVYQYALYPKFKHVQEIDLDLRPMLLLGQQLQQNLSPEPALEELLAL
ADHLTAEGQTTGLEIADHDLSESAAIIETAPVEVAVRTDIEETVAIFIEEAEEHLETIATFLRTEDEKSQDYNALIRAIH
TLRGSSSMAQIEQIFEASSKVEQLFKTLLQDEIVSTSKETALLMQYAEFISDYVHLLGQGDTEKLDAVYATFEAVWSDYG
FAVTESDAVQTQGLVSKLVELDIDLLLDAEFEFDKRAQVDYPEYIQALSQQAAELLAHTDSRAAKGIHEFTADLKSAYDA
LLKKPVLLNSNYAYELFAQAHQEFIHLFDTLAAGQRVILNDDIQKTLSELSAFVQQDLEIFAEETEKSGVEATTDTLPTA
DTLTTGSVDFAALSQRIAADRQQRESAETNRDFDEELLGIFLEEADELLAGIDEDLNTWSKKQDDTTSLNNLMRHLHTLK
GGANMIAASHIGLIAHELESIYERVIRQQIAVTPALIQIVRLVQDNVSDRIQSIRDDGIDYPATEAVAILQNIQALLSGQ
TLAAVESTTAEFNVTALEMLSTPEVPFEESVATEQPATDLAETEKLVETPGFTENQVERSEEDELKSIVEETFLEESEEI
LANAEKLLNQWFDQRSDRSLLLQLQRAAHSIKGGARMIETEEVASIAYELETTFEQFAVYQFNSNAYDGLLQKTLAWLKQ
AIFQRDYSGFEQLQSSLKKIAYVDVTAQLPERLAKTEHLVVSTDFGFVEGDGTEPPQMMGEWANTGSSDSNNEMIRISAD
LVEKMIDLSGENSINRSRIEMDLGQLGNTLNEMELAIKRLADQLRRMEGELESQIIAKHGSENSRYADFDPLEMDQYSSL
NQLSKSLAESASDLVDFKSTLADKIRETEGLLLQQSRIQAEIQESLMRTRLVPFDRMLPRLQRIVRQTSTTLNRPAELIV
QNTEGELDRNILERLVTPFEHMLRNAIDHGLEDTADRLALNKPEVGSIVLNISRQGTDVIVSFSDDGKGIDAEKIREKAL
SLDLIKADQPIDQDEILQYIFHPGFTTAKAVTQISGRGVGLDVVQSEIKSLGGHVSVSSELGKGTVFTIRVPTTVAVSDA
LMVKAGDQQYAISLAQIDRIVRIAPTTLETYFNSKDDYFKIDGENYKLRYLSEFVGTQPIPRLNNVGHSLPVLLIKGNSG
QTIALLVDQLVGSRAQIVVKPIGQQFANIGVVAGATILGDGQVCLILDGQNIARQIQATQRVKQMHDQRDGSRHSNARRL
VMIVDDSVTVRKVTSRLLERQGYDIVTAKDGVDAIEQLENVRPDLMLLDIEMPRMDGFEVTNLVRHHDIHRDLPIIMITS
RTGEKHRERAFSLGVTHYMGKPFQEAELLANIQQLIAEKQG

Nucleotide


Download         Length: 4446 bp        

>NTDB_id=1107089 ACLKM1_RS09940 WP_280560620.1 2091354..2095799(-) (chpA) [Acinetobacter pseudolwoffii strain M5_NDM]
ATGAAAGAAATATTAAAAAATTTAGTTGAAACGACAACGCTTCCTGAAGATAGTTATCTTGATCAAGATGCAGAAATTCT
TGAAATTTTTGTTGAGGAAATCGAAGAAATCTTCGTTGAGTTAAATGCTTTATTTCCAGAATGGCTGGTCAATCCAGATC
ATCAGGAAAATCTGAAGACCATTCGCCGTCATTTTCATACCCTGAAAGGTTCAGGTCGTATGGTGGGTGCAAAATCGGCA
GGGGAAATGGCCTGGGCAGTTGAAGATACCCTGAACCGGGTCTTGTCCGGTTCAATTCAGCTGACAGCGATGGTGCAAAA
ATTTGCCCAAGCGGTACTGAATGTCTATCAATATGCTTTATATCCAAAATTCAAACATGTACAGGAAATCGATCTCGACC
TGCGTCCAATGCTGCTGTTGGGACAACAATTACAACAAAACCTTTCACCTGAACCTGCGCTAGAAGAATTATTAGCATTG
GCCGATCATTTGACTGCCGAAGGTCAGACCACAGGGCTGGAAATTGCAGATCATGACCTAAGTGAATCTGCTGCTATTAT
CGAAACAGCGCCGGTAGAAGTAGCGGTTCGCACTGATATTGAAGAAACCGTGGCCATCTTCATTGAAGAAGCCGAAGAGC
ATCTGGAAACGATTGCCACCTTCCTGCGTACTGAAGATGAAAAATCACAAGATTATAATGCCCTGATTCGTGCCATTCAT
ACCTTGCGTGGCAGTTCATCGATGGCGCAGATTGAACAGATTTTTGAAGCCAGCTCTAAAGTTGAACAGTTATTTAAGAC
CTTGTTACAAGATGAAATTGTCTCGACCTCAAAAGAAACAGCCTTACTGATGCAATATGCCGAATTTATCAGTGATTATG
TGCATTTATTAGGTCAGGGGGATACCGAAAAACTAGATGCGGTCTATGCCACTTTTGAAGCAGTCTGGAGTGATTATGGC
TTTGCGGTCACTGAATCAGATGCGGTTCAAACCCAAGGTCTGGTGTCCAAACTGGTTGAACTGGATATTGACCTGTTGCT
CGATGCTGAGTTTGAATTCGATAAACGCGCACAAGTCGATTATCCGGAATATATCCAGGCACTGAGTCAACAGGCTGCAG
AATTACTGGCGCATACTGATAGCCGCGCGGCCAAAGGAATTCATGAATTCACGGCAGATCTGAAATCGGCTTATGATGCC
CTGCTTAAAAAGCCGGTGCTGTTAAACAGCAATTATGCTTATGAACTGTTTGCACAGGCACATCAGGAATTTATTCATTT
ATTTGATACCCTGGCCGCAGGACAGCGCGTCATTCTGAATGATGACATCCAAAAAACTTTAAGTGAACTGTCGGCATTTG
TACAACAGGATCTTGAGATCTTTGCTGAAGAGACTGAAAAGTCAGGCGTTGAGGCGACCACAGATACTCTCCCAACAGCT
GACACCTTAACCACAGGCAGCGTAGATTTCGCTGCCTTGAGCCAGCGTATTGCAGCCGATCGTCAACAGCGCGAGAGTGC
TGAAACCAACCGTGATTTCGATGAAGAACTGTTAGGTATCTTTCTGGAAGAAGCCGATGAATTGCTGGCAGGTATTGATG
AAGATCTGAATACCTGGAGCAAAAAACAGGATGATACGACTTCACTGAACAATCTGATGCGTCATTTGCATACCTTAAAA
GGTGGTGCAAACATGATTGCGGCTTCGCATATCGGTTTGATTGCCCATGAACTGGAAAGTATTTATGAACGGGTGATCCG
TCAGCAGATTGCCGTAACACCTGCTTTAATCCAGATTGTCCGTCTGGTACAGGATAACGTGTCCGACCGTATTCAGTCCA
TTCGAGATGATGGCATTGATTATCCGGCGACAGAAGCGGTGGCAATTTTACAAAATATTCAGGCACTACTTTCTGGGCAA
ACGTTGGCTGCTGTTGAAAGCACAACTGCTGAATTCAACGTGACCGCGTTAGAGATGCTATCGACTCCTGAAGTGCCATT
CGAAGAATCAGTGGCGACAGAACAGCCTGCAACTGATCTGGCTGAAACAGAAAAATTAGTTGAAACCCCTGGATTTACTG
AAAATCAAGTTGAACGCTCTGAAGAAGATGAGCTGAAATCAATCGTTGAAGAAACCTTCCTCGAAGAGTCTGAAGAAATT
CTGGCCAATGCAGAGAAGCTGCTCAATCAATGGTTTGATCAGCGTAGTGACCGTAGTTTATTACTTCAGTTACAACGTGC
TGCCCACAGTATTAAAGGTGGTGCACGCATGATTGAAACTGAAGAGGTGGCCAGCATTGCCTATGAACTGGAAACCACTT
TCGAGCAGTTTGCAGTTTATCAATTTAACTCGAATGCCTATGATGGCTTATTGCAGAAAACACTGGCCTGGTTAAAACAG
GCAATTTTCCAGCGCGACTATAGCGGTTTTGAGCAGCTTCAAAGCAGTCTGAAAAAGATTGCTTATGTGGACGTCACTGC
GCAATTGCCTGAGCGTCTGGCAAAAACAGAACATCTGGTGGTCAGTACCGACTTTGGTTTTGTTGAGGGTGATGGTACTG
AACCGCCACAGATGATGGGTGAGTGGGCGAATACAGGCAGTAGCGATAGCAATAACGAGATGATTCGTATCTCTGCTGAT
CTGGTCGAGAAGATGATTGACCTGTCGGGTGAGAACTCGATTAACCGTTCGCGGATCGAGATGGATCTGGGTCAGCTTGG
CAATACCCTGAACGAGATGGAACTGGCGATCAAACGACTTGCCGACCAGTTGCGTCGAATGGAAGGCGAGCTGGAATCAC
AGATTATTGCCAAACATGGTTCAGAAAATTCGCGCTATGCCGACTTCGATCCGCTGGAAATGGACCAGTATTCATCGTTG
AACCAGTTATCTAAATCTCTGGCAGAATCGGCATCGGATCTGGTCGATTTCAAGAGCACCTTGGCCGACAAGATTCGTGA
AACTGAAGGTTTATTATTACAACAATCGCGTATTCAGGCCGAGATTCAGGAAAGCCTGATGCGTACCCGTCTGGTGCCGT
TTGACCGGATGTTGCCGCGTTTACAACGTATTGTGCGTCAAACCTCAACCACCTTGAACCGTCCTGCCGAACTGATTGTG
CAGAATACTGAAGGTGAATTGGATCGTAATATTCTGGAACGTCTGGTTACGCCATTTGAACATATGTTGCGTAATGCCAT
TGACCACGGTCTGGAAGATACCGCAGATCGTCTGGCATTGAACAAGCCGGAAGTGGGTTCTATTGTATTGAACATCAGCC
GCCAAGGAACCGATGTCATCGTTTCTTTCAGTGATGATGGCAAGGGGATCGATGCGGAGAAAATTCGTGAGAAAGCCCTC
AGTCTGGATCTGATCAAAGCCGACCAGCCGATTGATCAGGATGAAATACTACAATATATCTTCCATCCTGGTTTCACTAC
CGCAAAAGCAGTCACCCAGATTTCCGGTCGTGGCGTTGGTCTGGACGTGGTACAAAGTGAAATCAAGTCGCTCGGTGGTC
ATGTTTCGGTCAGCTCGGAACTGGGTAAGGGCACGGTCTTTACGATTCGCGTACCGACGACAGTGGCCGTTAGTGATGCC
TTGATGGTGAAAGCGGGCGATCAGCAATATGCAATTTCTCTGGCGCAGATTGACCGAATCGTGCGGATTGCGCCGACCAC
ATTGGAAACTTACTTTAACAGTAAAGACGATTACTTCAAGATTGATGGTGAAAACTACAAGCTGCGTTATCTGTCTGAAT
TTGTCGGTACTCAGCCGATTCCACGTCTGAATAATGTCGGTCATTCATTGCCAGTGCTTCTGATTAAAGGCAACAGTGGC
CAAACCATTGCCTTGCTGGTCGATCAACTGGTGGGTTCACGTGCACAGATTGTGGTGAAACCGATTGGACAGCAGTTTGC
CAACATCGGGGTAGTGGCGGGTGCTACGATTCTGGGTGATGGTCAGGTCTGTCTGATTCTCGATGGCCAGAATATTGCGC
GTCAGATTCAGGCGACACAGCGTGTGAAACAGATGCATGATCAGCGTGATGGTTCGCGTCATTCTAACGCACGCCGTCTG
GTGATGATTGTCGATGACTCGGTGACAGTACGTAAGGTAACTTCGCGTCTGCTTGAACGTCAGGGCTATGACATTGTGAC
CGCCAAAGATGGTGTAGATGCGATCGAGCAGCTAGAAAATGTCAGACCAGATCTGATGCTGCTGGATATCGAAATGCCAC
GTATGGATGGTTTTGAAGTCACCAACCTGGTTCGTCACCATGATATTCACCGTGACTTGCCGATTATCATGATTACGTCG
CGTACTGGTGAGAAACATCGTGAACGTGCATTCAGTCTGGGCGTGACCCACTATATGGGTAAACCGTTCCAGGAAGCTGA
ACTGCTGGCCAATATTCAACAATTAATTGCCGAAAAACAGGGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

60.702

100

0.618


Multiple sequence alignment