Detailed information NTG1107085

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: ACLKM1_RS06885
• Genome accession: NZ_CP183903
• Coordinates: 1479093..1480289 (-)
• Length: 398 a.a.
• NCBI ID: WP_074382739.1
• Uniprot ID: -
• Organism: Acinetobacter pseudolwoffii strain M5_NDM
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1474093..1485289

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLKM1_RS06865	-	1475524..1475973 (+)	450	WP_005096996.1	MaoC/PaaZ C-terminal domain-containing protein	-
ACLKM1_RS06870	-	1476125..1477153 (+)	1029	WP_005096998.1	AraC family transcriptional regulator	-
ACLKM1_RS06875	gcvH	1477236..1477610 (+)	375	WP_005097000.1	glycine cleavage system protein GcvH	-
ACLKM1_RS06880	-	1477853..1479037 (+)	1185	WP_100328583.1	MFS transporter	-
ACLKM1_RS06885	pilU	1479093..1480289 (-)	1197	WP_074382739.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ACLKM1_RS06890	-	1480541..1481590 (-)	1050	WP_074382738.1	3-deoxy-7-phosphoheptulonate synthase	-
ACLKM1_RS06895	-	1482110..1482640 (-)	531	WP_074382737.1	hypothetical protein	-
ACLKM1_RS06900	-	1482851..1483963 (-)	1113	WP_100354801.1	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	-

Sequence

Protein

• Length: 398 a.a.
• Molecular weight: 45081.69 Da
• Isoelectric Point: 6.8700

>NTDB_id=1107085 ACLKM1_RS06885 WP_074382739.1 1479093..1480289(-) (pilU) [Acinetobacter pseudolwoffii strain M5_NDM]
MFATELLEEARKFMHHMLTKVVEYGGSDLFITADFPPSIKHQGLMKPFGQQELTAEKTKLFAYSLMNEKQRKEFETELEC
NFAITVPGVSRFRVNVFQQQLNVGMVIRTITAEIPNFQKLKLPDSLKHVIMEKRGLVLVVGGTGSGKSTSLAAMIDYRNE
NSAGHIITVEDPVEYVHKHKKSMITHREVGVDCHSWHNALKNTLRQAPDVILIGEIRDTETMEHAIAFAETGHLCLGTLH
SNNANQTLDRIINFFPEERRNQLLMDLSSNMKAIISQRLIRTQDGKGRRAAIEIMLNTPLISDLILKGEFHELKAIMAKS
RELGMQTFDQALFELYNQGEISYEEALRNADSTNELRLQIKLKSNRQDNAAVGESTQFSMLQKPKPEEKSAENQAVAE

Nucleotide

• Length: 1197 bp

>NTDB_id=1107085 ACLKM1_RS06885 WP_074382739.1 1479093..1480289(-) (pilU) [Acinetobacter pseudolwoffii strain M5_NDM]
ATGTTTGCAACAGAGCTCTTAGAAGAAGCACGAAAATTCATGCACCACATGCTGACCAAAGTGGTCGAATATGGTGGTTC
AGATTTATTTATTACCGCCGACTTTCCACCGAGTATTAAACATCAGGGTTTAATGAAGCCTTTTGGACAGCAAGAACTGA
CGGCTGAAAAAACCAAGCTGTTTGCCTATAGCCTGATGAATGAAAAGCAGCGCAAGGAATTTGAAACGGAACTGGAGTGC
AACTTTGCTATCACTGTGCCGGGTGTTTCGCGTTTTCGGGTCAACGTGTTCCAGCAACAACTCAATGTTGGCATGGTGAT
TCGTACTATTACCGCAGAAATTCCAAATTTCCAGAAGCTCAAACTTCCTGATTCACTTAAACATGTGATTATGGAGAAAC
GTGGTCTGGTGCTGGTGGTCGGGGGAACCGGCTCAGGAAAGTCAACCTCGCTCGCTGCGATGATTGACTACCGCAATGAA
AATTCAGCCGGGCATATTATTACCGTGGAAGATCCGGTGGAGTATGTACATAAACATAAAAAATCCATGATTACGCATCG
TGAAGTCGGCGTGGACTGTCATTCCTGGCACAATGCGCTGAAAAATACCTTGCGTCAGGCACCCGATGTGATTCTGATCG
GGGAAATTCGTGATACTGAAACCATGGAACATGCGATTGCTTTTGCCGAAACCGGGCATCTTTGTCTGGGAACTTTGCAC
TCCAACAATGCCAATCAGACTTTAGACCGGATTATTAACTTCTTCCCGGAAGAGCGCCGCAATCAGTTATTGATGGATTT
ATCCTCGAATATGAAGGCGATTATTTCCCAGCGTCTGATTCGGACGCAGGATGGTAAAGGCCGTCGTGCAGCGATTGAAA
TCATGTTAAATACGCCATTGATTTCCGACCTGATTTTGAAAGGTGAGTTTCATGAGCTGAAAGCGATTATGGCAAAATCC
CGTGAATTGGGGATGCAAACCTTTGACCAGGCCTTATTTGAATTGTATAACCAGGGCGAAATTTCTTATGAGGAAGCGTT
ACGCAATGCCGACTCCACCAATGAATTACGCTTACAGATCAAGCTAAAAAGTAATCGTCAGGATAATGCAGCAGTCGGAG
AAAGTACGCAGTTTTCTATGCTACAAAAACCAAAACCTGAAGAAAAATCAGCAGAAAATCAAGCTGTAGCTGAATAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (119-282)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	62.069	87.437	0.543
pilU	Acinetobacter baylyi ADP1	55.908	87.186	0.487
pilU	Vibrio cholerae strain A1552	51.507	91.709	0.472