Detailed information NTG1107066

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ACLKM2_RS12255
• Genome accession: NZ_CP183899
• Coordinates: 2576050..2577474 (+)
• Length: 474 a.a.
• NCBI ID: WP_244782687.1
• Uniprot ID: -
• Organism: Acinetobacter pseudolwoffii strain M8_NDM_tet(X3)
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 2571050..2582474

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLKM2_RS12235	thrC	2571330..2572469 (+)	1140	WP_005094446.1	threonine synthase	-
ACLKM2_RS12240	-	2572524..2573591 (-)	1068	WP_141667085.1	serine hydrolase	-
ACLKM2_RS12245	-	2573811..2574446 (+)	636	WP_005108454.1	response regulator	-
ACLKM2_RS12250	pilS	2574469..2576034 (+)	1566	WP_411686344.1	two-component system sensor histidine kinase NtrB	Regulator
ACLKM2_RS12255	pilR	2576050..2577474 (+)	1425	WP_244782687.1	sigma-54-dependent transcriptional regulator	Regulator
ACLKM2_RS12260	-	2577475..2578647 (-)	1173	WP_180049954.1	S41 family peptidase	-
ACLKM2_RS12265	gpmI	2578679..2580226 (-)	1548	WP_411686345.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
ACLKM2_RS12270	lptG	2580351..2581421 (-)	1071	WP_005094459.1	LPS export ABC transporter permease LptG	-

Sequence

Protein

• Length: 474 a.a.
• Molecular weight: 53630.78 Da
• Isoelectric Point: 6.0932

>NTDB_id=1107066 ACLKM2_RS12255 WP_244782687.1 2576050..2577474(+) (pilR) [Acinetobacter pseudolwoffii strain M8_NDM_tet(X3)]
MSVEQQPLVLLVDDEEDLCTLMQMSLLRMGIRTHIAHRLQDAKKCLADHQYDACLTDLNLPDGNGLELLEWIGHLYPALP
VAVLTAYGNMEIAIAALKAGAFDFVSKPINQKHLEQLLQKALNKPVDYSHNNPNDALEHKMLIGQSIPIQHLRITLQKIA
RSQAPVFITGESGTGKEVVANLVHRLSNRNEGPFIAINCGAIPTELMESELFGHKKGSFTGAAQDKQGLIQSAHGGSLFL
DEIAELPLSMQVKLLRAVQEKRIRPLGSDTEIDVDFRVISATHQDLEALVQQGKFRQDLYFRIHVMDLTLPPLRERSQDI
LLLAEHFIQKICQEWGIANKKLTERSKEFLLEQYYPGNVRELRNIMERAITLSDEERIDLQHLQSAPLRQALNSAQEMNT
LTSEIIATDTLIAPRKLPEEGLELYLEKIEKEVLLNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDTEEDE

Nucleotide

• Length: 1425 bp

>NTDB_id=1107066 ACLKM2_RS12255 WP_244782687.1 2576050..2577474(+) (pilR) [Acinetobacter pseudolwoffii strain M8_NDM_tet(X3)]
ATGAGTGTGGAACAACAGCCACTGGTGCTCTTGGTGGATGATGAAGAAGATTTATGCACCCTCATGCAAATGTCGTTGCT
GCGGATGGGGATTCGTACGCACATCGCACATCGTCTGCAAGATGCTAAAAAATGTCTTGCAGATCATCAATATGATGCCT
GTTTAACTGACCTGAACCTGCCCGATGGCAATGGTTTGGAGTTACTGGAGTGGATTGGTCATCTCTACCCTGCACTTCCG
GTCGCGGTTCTGACCGCCTATGGCAACATGGAAATCGCGATTGCTGCACTCAAGGCCGGTGCCTTTGACTTTGTCAGCAA
ACCGATCAATCAGAAACATCTGGAACAGCTGCTACAAAAAGCACTGAATAAACCGGTGGATTATTCCCATAATAATCCAA
ATGATGCTTTAGAACATAAAATGCTGATTGGGCAATCGATACCGATTCAGCACTTACGTATTACCTTACAAAAAATTGCC
CGCTCACAGGCACCGGTTTTTATTACTGGCGAATCGGGAACTGGCAAGGAAGTGGTGGCCAATCTGGTCCATCGCCTGAG
CAACCGTAATGAAGGCCCTTTTATTGCAATTAACTGTGGTGCGATTCCCACTGAACTGATGGAAAGCGAACTGTTTGGGC
ATAAGAAAGGCAGCTTTACTGGCGCCGCTCAGGACAAACAGGGGCTGATTCAATCGGCACATGGTGGCAGCCTGTTTCTG
GATGAAATTGCAGAACTGCCACTTTCCATGCAGGTCAAACTGTTACGTGCCGTACAGGAAAAACGTATTCGTCCACTCGG
TTCAGATACTGAAATTGATGTGGATTTCCGCGTCATCAGTGCCACTCATCAGGATCTGGAAGCCTTGGTACAACAAGGCA
AATTCCGTCAGGATTTATATTTCCGTATTCATGTGATGGATCTGACTTTACCGCCGCTGCGTGAACGGAGTCAGGATATT
CTCTTGCTGGCCGAACATTTTATTCAGAAGATTTGCCAGGAATGGGGCATTGCCAATAAAAAACTGACAGAACGCAGTAA
AGAATTTTTATTGGAACAATATTATCCGGGTAATGTTCGTGAATTGCGTAATATTATGGAACGTGCAATTACCTTGAGTG
ATGAAGAACGGATTGATCTTCAGCACCTGCAAAGTGCACCGTTACGTCAGGCTCTTAACAGCGCTCAGGAGATGAATACG
CTCACGAGCGAGATCATTGCGACTGACACCCTGATTGCCCCGAGAAAGCTCCCTGAAGAAGGCCTAGAGCTATATTTAGA
AAAGATTGAAAAAGAAGTCCTACTCAATGCGCTGAATCTAACGCACTGGAACCGCACACTGGCCGCGAAAAAGCTCGGTA
TGTCATTCCGCTCCCTACGTTATCGTTTGAAAAAGTTCGGACTGGATACTGAGGAAGACGAATAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (9-118)

• Bacterial regulatory protein, Fis family (HTH_8) (426-466)

• Sigma-54 interaction domain (Sigma54_activat) (142-308)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	73.15	99.789	0.73
pilR	Pseudomonas aeruginosa PAK	49.241	97.257	0.479