Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACLKM3_RS04165 Genome accession   NZ_CP183897
Coordinates   880853..881236 (+) Length   127 a.a.
NCBI ID   WP_004975524.1    Uniprot ID   A0A1E8E5G7
Organism   Acinetobacter towneri strain M10_NDM     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 875853..886236
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLKM3_RS04155 - 878747..879880 (-) 1134 WP_019837499.1 efflux RND transporter periplasmic adaptor subunit -
  ACLKM3_RS04160 - 879933..880514 (-) 582 WP_171066656.1 hypothetical protein -
  ACLKM3_RS04165 pilG 880853..881236 (+) 384 WP_004975524.1 twitching motility response regulator PilG Regulator
  ACLKM3_RS04170 - 881273..881641 (+) 369 WP_019837497.1 response regulator -
  ACLKM3_RS04175 - 881645..882181 (+) 537 WP_019837496.1 chemotaxis protein CheW -
  ACLKM3_RS04180 - 882227..884302 (+) 2076 WP_019837495.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14243.30 Da        Isoelectric Point: 4.7172

>NTDB_id=1107011 ACLKM3_RS04165 WP_004975524.1 880853..881236(+) (pilG) [Acinetobacter towneri strain M10_NDM]
MDDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVVTAVDGFEALSKIAESNPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVTA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=1107011 ACLKM3_RS04165 WP_004975524.1 880853..881236(+) (pilG) [Acinetobacter towneri strain M10_NDM]
ATGGACGATAAATTCCAAAATCTAAAAGTCATGGTGATTGATGATTCAAAAACCATTCGCCGTACAGCCGAAACGCTCTT
ACAACGAGAAGGTTGCGAAGTGGTTACCGCAGTAGATGGATTTGAAGCTTTATCCAAAATTGCAGAATCAAATCCTGATA
TTGTGTTCGTAGATATTATGATGCCGCGCCTAGATGGTTACCAAACGTGTGCCTTAATTAAAAACTCGCAAAATTACCAA
AACATTCCTGTGATTATGCTATCTAGTAAAGATGGTTTATTTGATCAAGCCAAAGGACGTGTTGTGGGTTCTGATGAGTA
TCTGACTAAACCATTTAGTAAAGATGAATTATTAAACGCCATTCGTAACCACGTGACAGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1E8E5G7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

95.276

100

0.953
  vicR Streptococcus mutans UA159

41.88

92.126

0.386
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment