Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | ACN6MT_RS04240 | Genome accession | NZ_CP183883 |
| Coordinates | 890301..890834 (+) | Length | 177 a.a. |
| NCBI ID | WP_063255174.1 | Uniprot ID | - |
| Organism | Neobacillus niacini strain BE6 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 885301..895834
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACN6MT_RS04220 (ACN6MT_04220) | - | 885965..886162 (+) | 198 | WP_045519309.1 | DUF951 domain-containing protein | - |
| ACN6MT_RS04225 (ACN6MT_04225) | - | 886234..888243 (+) | 2010 | WP_419954856.1 | molybdopterin-dependent oxidoreductase | - |
| ACN6MT_RS04230 (ACN6MT_04230) | ychF | 888435..889535 (+) | 1101 | WP_063255171.1 | redox-regulated ATPase YchF | - |
| ACN6MT_RS04235 (ACN6MT_04235) | rpsF | 889947..890234 (+) | 288 | WP_063255172.1 | 30S ribosomal protein S6 | - |
| ACN6MT_RS04240 (ACN6MT_04240) | ssbA | 890301..890834 (+) | 534 | WP_063255174.1 | single-stranded DNA-binding protein | Machinery gene |
| ACN6MT_RS04245 (ACN6MT_04245) | rpsR | 890883..891125 (+) | 243 | WP_063255175.1 | 30S ribosomal protein S18 | - |
| ACN6MT_RS04250 (ACN6MT_04250) | - | 891289..892233 (+) | 945 | WP_063255176.1 | YybS family protein | - |
| ACN6MT_RS04255 (ACN6MT_04255) | - | 892260..894233 (+) | 1974 | WP_419954857.1 | DHH family phosphoesterase | - |
| ACN6MT_RS04260 (ACN6MT_04260) | rplI | 894230..894679 (+) | 450 | WP_063255178.1 | 50S ribosomal protein L9 | - |
Sequence
Protein
Download Length: 177 a.a. Molecular weight: 19448.26 Da Isoelectric Point: 4.9902
>NTDB_id=1106694 ACN6MT_RS04240 WP_063255174.1 890301..890834(+) (ssbA) [Neobacillus niacini strain BE6]
MMNRVVLVGRLTKDPDLRYTPNGVPVATFTLAVNRPFSSQSGEREADFINCVVWRKPAENVANFLKKGSLAGVDGRIQTR
NYEGQDGKRVYVTEVQAESVQFLEPKNASGGGGGRSDNDYFGAPPREPQGNPYGGGNQNQRQYQNNNNNNNKGFTKVDDD
PFSGNGQIDISDDDLPF
MMNRVVLVGRLTKDPDLRYTPNGVPVATFTLAVNRPFSSQSGEREADFINCVVWRKPAENVANFLKKGSLAGVDGRIQTR
NYEGQDGKRVYVTEVQAESVQFLEPKNASGGGGGRSDNDYFGAPPREPQGNPYGGGNQNQRQYQNNNNNNNKGFTKVDDD
PFSGNGQIDISDDDLPF
Nucleotide
Download Length: 534 bp
>NTDB_id=1106694 ACN6MT_RS04240 WP_063255174.1 890301..890834(+) (ssbA) [Neobacillus niacini strain BE6]
ATGATGAATCGTGTCGTGCTTGTTGGCCGTTTAACGAAAGATCCTGATTTGCGTTATACACCAAACGGGGTTCCTGTTGC
TACCTTTACTTTAGCTGTTAACCGTCCGTTTTCTAGTCAGTCAGGTGAGCGTGAAGCAGACTTTATTAATTGTGTTGTTT
GGCGTAAACCTGCTGAAAATGTGGCAAACTTCTTGAAAAAGGGCAGTCTCGCAGGAGTGGATGGCCGCATTCAAACTCGC
AACTATGAAGGACAAGATGGTAAGCGTGTTTACGTTACTGAAGTTCAGGCAGAAAGTGTTCAATTTCTTGAACCGAAAAA
TGCGTCTGGCGGCGGTGGCGGAAGAAGCGACAATGATTACTTCGGCGCTCCTCCTAGGGAACCGCAAGGAAATCCTTATG
GCGGCGGCAATCAGAATCAACGACAGTATCAAAACAATAACAATAACAATAATAAGGGTTTTACAAAAGTGGATGATGAT
CCGTTCTCAGGTAACGGTCAGATAGACATCTCCGATGATGATCTACCATTTTAA
ATGATGAATCGTGTCGTGCTTGTTGGCCGTTTAACGAAAGATCCTGATTTGCGTTATACACCAAACGGGGTTCCTGTTGC
TACCTTTACTTTAGCTGTTAACCGTCCGTTTTCTAGTCAGTCAGGTGAGCGTGAAGCAGACTTTATTAATTGTGTTGTTT
GGCGTAAACCTGCTGAAAATGTGGCAAACTTCTTGAAAAAGGGCAGTCTCGCAGGAGTGGATGGCCGCATTCAAACTCGC
AACTATGAAGGACAAGATGGTAAGCGTGTTTACGTTACTGAAGTTCAGGCAGAAAGTGTTCAATTTCTTGAACCGAAAAA
TGCGTCTGGCGGCGGTGGCGGAAGAAGCGACAATGATTACTTCGGCGCTCCTCCTAGGGAACCGCAAGGAAATCCTTATG
GCGGCGGCAATCAGAATCAACGACAGTATCAAAACAATAACAATAACAATAATAAGGGTTTTACAAAAGTGGATGATGAT
CCGTTCTCAGGTAACGGTCAGATAGACATCTCCGATGATGATCTACCATTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
65.746 |
100 |
0.672 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
53.371 |
100 |
0.537 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
64.151 |
59.887 |
0.384 |