Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGC   Type   Machinery gene
Locus tag   ACN6MY_RS17670 Genome accession   NZ_CP183879
Coordinates   3559661..3559972 (-) Length   103 a.a.
NCBI ID   WP_419881357.1    Uniprot ID   -
Organism   Peribacillus sp. B-H-3     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3554661..3564972
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN6MY_RS17635 (ACN6MY_17635) - 3555308..3556996 (+) 1689 WP_419881351.1 DEAD/DEAH box helicase -
  ACN6MY_RS17640 (ACN6MY_17640) - 3556974..3557789 (+) 816 WP_419884203.1 YqhG family protein -
  ACN6MY_RS17645 (ACN6MY_17645) - 3557869..3558045 (-) 177 WP_419881352.1 YqzE family protein -
  ACN6MY_RS17650 (ACN6MY_17650) comGG 3558097..3558477 (-) 381 WP_419881353.1 competence type IV pilus minor pilin ComGG -
  ACN6MY_RS17655 (ACN6MY_17655) comGF 3558470..3558907 (-) 438 WP_419881354.1 competence type IV pilus minor pilin ComGF -
  ACN6MY_RS17660 (ACN6MY_17660) - 3558888..3559223 (-) 336 WP_419881355.1 hypothetical protein -
  ACN6MY_RS17665 (ACN6MY_17665) comGD 3559210..3559686 (-) 477 WP_419881356.1 competence type IV pilus minor pilin ComGD -
  ACN6MY_RS17670 (ACN6MY_17670) comGC 3559661..3559972 (-) 312 WP_419881357.1 competence type IV pilus major pilin ComGC Machinery gene
  ACN6MY_RS17675 (ACN6MY_17675) comGB 3559982..3561013 (-) 1032 WP_419881358.1 competence type IV pilus assembly protein ComGB -
  ACN6MY_RS17680 (ACN6MY_17680) comGA 3561000..3562070 (-) 1071 WP_419881359.1 competence type IV pilus ATPase ComGA Machinery gene
  ACN6MY_RS17685 (ACN6MY_17685) - 3562204..3562575 (-) 372 WP_419881360.1 hypothetical protein -
  ACN6MY_RS17690 (ACN6MY_17690) - 3562669..3563472 (-) 804 WP_419881361.1 hypothetical protein -
  ACN6MY_RS17695 (ACN6MY_17695) - 3563665..3563982 (-) 318 WP_419881362.1 hypothetical protein -
  ACN6MY_RS17700 (ACN6MY_17700) - 3564132..3564677 (+) 546 WP_419884204.1 N-acetyltransferase family protein -

Sequence

Protein


Download         Length: 103 a.a.        Molecular weight: 11064.85 Da        Isoelectric Point: 5.6397

>NTDB_id=1106642 ACN6MY_RS17670 WP_419881357.1 3559661..3559972(-) (comGC) [Peribacillus sp. B-H-3]
MMNEKGFTLIEMLIVLLVISILLIITVPNITKHQSTIQTKGCEAFSKMVQAQVEAYQIDHNKLPAGVAELKTEGYLKETT
CPNGSAVTIDTGGQVSVSDNGGK

Nucleotide


Download         Length: 312 bp        

>NTDB_id=1106642 ACN6MY_RS17670 WP_419881357.1 3559661..3559972(-) (comGC) [Peribacillus sp. B-H-3]
ATGATGAATGAAAAAGGTTTTACCCTTATTGAAATGCTCATTGTATTATTAGTCATTTCCATTTTGCTGATTATAACAGT
CCCGAATATCACCAAGCATCAATCAACCATTCAGACAAAGGGATGCGAAGCCTTTTCAAAAATGGTGCAGGCTCAGGTTG
AGGCCTATCAGATTGACCATAATAAGCTTCCCGCCGGAGTTGCCGAGTTAAAAACAGAAGGCTACCTGAAGGAAACCACC
TGTCCAAATGGGTCAGCGGTTACTATTGATACGGGCGGCCAGGTAAGTGTATCGGATAATGGAGGAAAATGA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(1-26)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGC Bacillus subtilis subsp. subtilis str. 168

57.143

95.146

0.544
  comGC Staphylococcus aureus MW2

47.872

91.262

0.437
  comGC Staphylococcus aureus N315

47.872

91.262

0.437

Multiple sequence alignment