Detailed information NTG0110619

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ACAM27_RS16595
• Genome accession: NZ_AP031605
• Coordinates: 3657273..3658661 (+)
• Length: 462 a.a.
• NCBI ID: WP_369612330.1
• Uniprot ID: -
• Organism: Marinobacter sp. RI1
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3652273..3663661

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACAM27_RS16580 (MspRI1_32880)	-	3652978..3653811 (+)	834	WP_369612328.1	outer membrane protein assembly factor BamD	-
ACAM27_RS16585 (MspRI1_32890)	-	3653820..3655484 (-)	1665	WP_369612329.1	NAD+ synthase	-
ACAM27_RS16590 (MspRI1_32900)	-	3655577..3657223 (+)	1647	WP_023009262.1	PAS domain-containing sensor histidine kinase	-
ACAM27_RS16595 (MspRI1_32910)	pilR	3657273..3658661 (+)	1389	WP_369612330.1	sigma-54-dependent transcriptional regulator	Regulator
ACAM27_RS16600	-	3658827..3659303 (+)	477	WP_369612887.1	GspH/FimT family protein	-
ACAM27_RS16605	-	3659305..3659721 (-)	417	WP_369612331.1	type IV pilin protein	-
ACAM27_RS16610 (MspRI1_32930)	-	3659718..3660044 (-)	327	WP_369612332.1	hypothetical protein	-
ACAM27_RS16615 (MspRI1_32940)	-	3660084..3663476 (-)	3393	WP_369612333.1	pilus assembly protein	-

Sequence

Protein

• Length: 462 a.a.
• Molecular weight: 50685.76 Da
• Isoelectric Point: 4.8034

>NTDB_id=110619 ACAM27_RS16595 WP_369612330.1 3657273..3658661(+) (pilR) [Marinobacter sp. RI1]
MTTQTALIVDDEPDIRDLLEITLTRMGITTYTAPDLASARELLQQHNPQLCLTDMNLPDGNGIELVHWIQQHTPCTPVAV
ITAYGSMDTAIESLKAGAFDFVSKPVELPRLRELVNSALKLSEPQTRGTADSDEPGLLLGDSPQIRKLRTQTKKLARSQA
PVFISGESGSGKELVARMIHLQGPRSDGPFIAVNCGAIPSELMESEFFGHKKGSFTGAVENKQGLFRSADGGTLFLDEVA
DLPLAMQVKLLRAIQEKAVRPVGDTKEVPVDIRVLSATHKNLPELVQEGDFRQDLFYRINVIELAVPPLRERAEDIPLLA
EHILQRIAREYECDPARLTPAAIERLKGYEFPGNVRELENILERAFTLCDEDLIDAGDLHLGGGVAPAGSGSATRETESE
TNAAAAPVPEGEIDLEGYLESIERQAIEKALEATRWNKTAAAKRLGISFRALRYRLKKLGME

Nucleotide

• Length: 1389 bp

>NTDB_id=110619 ACAM27_RS16595 WP_369612330.1 3657273..3658661(+) (pilR) [Marinobacter sp. RI1]
ATGACTACACAGACAGCGCTGATTGTTGACGACGAGCCGGATATCCGGGATCTACTGGAAATCACCCTCACCCGGATGGG
CATTACCACCTACACTGCCCCCGATCTGGCCAGCGCCAGGGAATTGCTGCAGCAGCACAACCCCCAGCTCTGCCTGACCG
ACATGAACCTGCCCGACGGCAATGGCATAGAGCTTGTTCACTGGATCCAGCAACACACTCCCTGCACCCCCGTTGCAGTG
ATCACCGCCTATGGCAGCATGGATACGGCTATCGAATCGCTCAAAGCCGGCGCTTTTGACTTCGTATCCAAGCCCGTGGA
GCTGCCCCGCCTGCGGGAACTGGTCAACAGCGCTCTGAAGCTGTCAGAACCCCAGACCCGCGGAACCGCTGATTCCGATG
AGCCTGGCCTGCTTCTGGGCGACTCGCCGCAAATCCGGAAACTGCGCACACAGACGAAAAAGCTCGCCAGAAGCCAGGCA
CCGGTGTTTATCAGCGGCGAATCCGGCAGCGGCAAGGAGCTGGTCGCCCGCATGATTCACCTGCAAGGCCCCAGAAGTGA
CGGCCCCTTTATCGCAGTGAACTGTGGCGCAATCCCCTCGGAATTGATGGAAAGCGAGTTCTTTGGCCACAAGAAGGGCA
GCTTCACCGGAGCCGTCGAGAACAAGCAGGGCCTGTTCCGCTCTGCCGATGGTGGCACCCTATTTCTGGACGAAGTGGCC
GACCTGCCACTGGCCATGCAGGTAAAACTGCTGCGTGCTATCCAGGAGAAAGCCGTCCGCCCGGTCGGCGATACCAAAGA
AGTGCCAGTGGACATCCGGGTGCTCAGCGCCACCCACAAAAACCTCCCGGAACTGGTGCAGGAAGGCGACTTCCGCCAGG
ATCTGTTCTACCGGATCAACGTTATCGAACTGGCGGTTCCGCCGCTGCGCGAGCGCGCCGAGGATATTCCCCTGCTGGCC
GAGCACATTCTCCAACGCATAGCGCGGGAATACGAGTGCGACCCGGCCAGACTCACCCCGGCCGCCATCGAGCGACTCAA
AGGCTACGAGTTTCCCGGCAACGTGCGCGAACTGGAGAACATTCTGGAACGCGCTTTTACCCTGTGCGACGAAGACCTGA
TTGATGCCGGAGATCTCCATCTTGGCGGCGGTGTTGCGCCAGCGGGCTCGGGCTCGGCGACCAGAGAGACGGAGTCAGAA
ACGAATGCTGCAGCAGCTCCGGTGCCCGAGGGTGAGATCGATCTTGAGGGCTATCTGGAAAGCATCGAGAGACAGGCCAT
TGAAAAAGCACTGGAAGCGACACGGTGGAATAAAACGGCGGCGGCCAAGAGACTGGGGATCAGCTTTCGGGCGTTGCGGT
ACCGGTTGAAGAAGTTGGGGATGGAGTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (7-115)

• Sigma-54 interaction domain (Sigma54_activat) (139-304)

• Bacterial regulatory protein, Fis family (HTH_8) (419-459)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	64.363	100	0.645
pilR	Acinetobacter baumannii strain A118	54.113	100	0.541
luxO	Vibrio cholerae strain A1552	37.225	98.268	0.366