Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   V3C22_RS07185 Genome accession   NZ_CP183775
Coordinates   1498071..1499072 (-) Length   333 a.a.
NCBI ID   WP_002284646.1    Uniprot ID   -
Organism   Streptococcus mutans strain Xc     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1493071..1504072
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V3C22_RS07160 (V3C22_07160) - 1493107..1493748 (-) 642 WP_002291006.1 hypothetical protein -
  V3C22_RS07165 (V3C22_07165) - 1493742..1493940 (-) 199 Protein_1383 hypothetical protein -
  V3C22_RS07170 (V3C22_07170) - 1494019..1495353 (-) 1335 WP_002264974.1 glycosyltransferase family 4 protein -
  V3C22_RS07175 (V3C22_07175) - 1495355..1496353 (-) 999 WP_226707104.1 glycosyltransferase -
  V3C22_RS07180 (V3C22_07180) - 1496463..1497923 (-) 1461 WP_226707106.1 alpha-amylase -
  V3C22_RS07185 (V3C22_07185) ccpA 1498071..1499072 (-) 1002 WP_002284646.1 catabolite control protein A Regulator
  V3C22_RS07190 (V3C22_07190) - 1499235..1500314 (+) 1080 WP_002271825.1 M24 family metallopeptidase -
  V3C22_RS07195 (V3C22_07195) - 1500429..1501010 (-) 582 WP_002262795.1 CDP-archaeol synthase -
  V3C22_RS07200 (V3C22_07200) - 1501137..1501907 (-) 771 WP_002268260.1 carbonic anhydrase -
  V3C22_RS07205 (V3C22_07205) celB 1502172..1503530 (-) 1359 WP_002262793.1 PTS cellobiose transporter subunit IIC -
  V3C22_RS07210 (V3C22_07210) - 1503546..1504064 (-) 519 WP_002262792.1 hypothetical protein -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36670.94 Da        Isoelectric Point: 6.8583

>NTDB_id=1105956 V3C22_RS07185 WP_002284646.1 1498071..1499072(-) (ccpA) [Streptococcus mutans strain Xc]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYFS
ILAKGIDDIATMYKYNIVLASSDEDDDKEVNVINTLFAKQVDGIIFMGHHLTEKIRAEFSRARTPVVLSGTVDLEHQLPN
VNIDHSKAAQDAVALLAKHHDKIAFVSGPLIDDINGKVRLAGYKEGLKKKGLPFKEGLVFEAQYKYQEGYQLAQRVINSG
ATAAYVTEDELAAGLLNGLFAAGKKVPEDFEIITSNDSTIALYTRPNMTSISQPIYDLGAVAMRMLTKIMNKEELEEKEI
VLNHGIRERGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=1105956 V3C22_RS07185 WP_002284646.1 1498071..1499072(-) (ccpA) [Streptococcus mutans strain Xc]
ATGAACACAGATGACACAATCACTATTTATGATGTTGCCCGTGAAGCGGGAGTGTCCATGGCAACTGTCAGCCGTGTTGT
GAATGGAAATAAAAATGTCAAAGAGAATACCCGCAAAAAAGTCCTAGAAGTCATTGACCGTCTTGATTATCGGCCAAATG
CTGTGGCGCGTGGTTTGGCAAGTAAGAAAACGACTACGGTAGGTGTGGTTATCCCTAATATTGCTAATGCTTATTTTTCT
ATTTTAGCTAAGGGAATTGATGACATTGCAACCATGTATAAATATAATATTGTACTGGCTTCAAGTGATGAAGATGACGA
TAAGGAAGTCAATGTTATCAATACTTTATTTGCTAAACAGGTTGATGGTATTATTTTTATGGGACATCATTTAACTGAAA
AAATTCGCGCTGAATTTTCACGAGCACGGACACCGGTTGTTTTATCAGGTACTGTAGATCTGGAGCATCAACTCCCCAAT
GTTAATATTGATCATAGTAAGGCAGCACAAGATGCCGTAGCTTTATTGGCCAAACATCATGATAAGATTGCTTTTGTATC
GGGTCCCCTTATTGATGATATCAATGGCAAGGTACGTCTGGCTGGTTATAAAGAAGGCCTGAAAAAGAAAGGATTGCCTT
TCAAAGAAGGACTTGTTTTTGAAGCTCAATATAAGTATCAAGAAGGATATCAGTTAGCGCAGCGTGTCATTAATTCAGGC
GCAACAGCTGCTTATGTTACTGAGGATGAGTTGGCTGCTGGGCTGTTAAATGGTTTGTTTGCTGCTGGTAAGAAAGTCCC
AGAAGACTTTGAAATTATCACGAGTAATGATTCTACTATTGCGCTTTATACTCGTCCTAATATGACATCTATCAGTCAGC
CGATTTATGATTTAGGAGCAGTTGCTATGCGCATGTTAACAAAGATTATGAACAAGGAAGAATTGGAAGAAAAAGAAATT
GTTCTTAATCATGGTATCAGAGAAAGAGGAACAACTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.378

100

0.784

  ccpA Streptococcus pneumoniae D39

75.976

100

0.76

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.589

99.399

0.553


Multiple sequence alignment