Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   V3C22_RS04360 Genome accession   NZ_CP183775
Coordinates   910655..911089 (+) Length   144 a.a.
NCBI ID   WP_002263292.1    Uniprot ID   A0AAX1K4B8
Organism   Streptococcus mutans strain Xc     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 905655..916089
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V3C22_RS04330 (V3C22_04330) gdhA 905836..907185 (+) 1350 WP_002302759.1 NADP-specific glutamate dehydrogenase -
  V3C22_RS04335 (V3C22_04335) - 907295..907678 (-) 384 WP_002281981.1 DUF3021 family protein -
  V3C22_RS04340 (V3C22_04340) queF 907787..908275 (-) 489 WP_002265143.1 preQ(1) synthase -
  V3C22_RS04345 (V3C22_04345) queE 908288..909004 (-) 717 WP_002263289.1 7-carboxy-7-deazaguanine synthase QueE -
  V3C22_RS04350 (V3C22_04350) queD 909001..909447 (-) 447 WP_002266457.1 6-carboxytetrahydropterin synthase QueD -
  V3C22_RS04355 (V3C22_04355) queC 909447..910100 (-) 654 WP_088741840.1 7-cyano-7-deazaguanine synthase QueC -
  V3C22_RS04360 (V3C22_04360) rcrR 910655..911089 (+) 435 WP_002263292.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  V3C22_RS04365 (V3C22_04365) rcrP 911093..912895 (+) 1803 WP_226718790.1 ATP-binding cassette domain-containing protein Regulator
  V3C22_RS04370 (V3C22_04370) rcrQ 912885..914639 (+) 1755 WP_002275251.1 ABC transporter ATP-binding protein Regulator
  V3C22_RS04375 (V3C22_04375) tpx 914836..915321 (+) 486 WP_002267998.1 thiol peroxidase -
  V3C22_RS04380 (V3C22_04380) - 915482..915928 (+) 447 Protein_831 hypothetical protein -

Sequence

Protein


Download         Length: 144 a.a.        Molecular weight: 16720.58 Da        Isoelectric Point: 10.5126

>NTDB_id=1105940 V3C22_RS04360 WP_002263292.1 910655..911089(+) (rcrR) [Streptococcus mutans strain Xc]
MKEPFSEFKNLITATERYIQELSKSHGVEHLSGPQGWTVMFLKDNQGKEIFIKDIEKRLDISKSVTSNLIKRMEKNGFIS
VIPSRKDRRYKQIVLTPLGQEKAGKITVFLTDLKKLLLKDISQEDLSVARKVFKQIKQNLEKKE

Nucleotide


Download         Length: 435 bp        

>NTDB_id=1105940 V3C22_RS04360 WP_002263292.1 910655..911089(+) (rcrR) [Streptococcus mutans strain Xc]
ATGAAGGAGCCTTTTAGTGAATTTAAAAACCTCATTACAGCAACAGAAAGATATATTCAAGAATTATCCAAAAGCCATGG
TGTTGAACATCTGTCCGGACCTCAGGGATGGACAGTTATGTTTTTAAAGGATAATCAAGGAAAGGAAATTTTTATTAAAG
ATATTGAAAAAAGGTTAGATATCTCAAAATCTGTGACCAGTAATCTCATTAAACGAATGGAAAAAAATGGTTTTATTTCT
GTTATTCCTTCCAGAAAAGACAGACGATACAAGCAAATTGTTTTAACGCCATTAGGTCAGGAAAAAGCTGGAAAAATAAC
TGTTTTTTTAACAGATCTTAAAAAGTTGCTTCTAAAAGATATTAGTCAGGAAGACTTATCAGTTGCTCGAAAGGTTTTTA
AACAAATCAAACAAAATTTAGAAAAGAAGGAGTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(31-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

100

100

1

Multiple sequence alignment