Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   V3C22_RS04365 Genome accession   NZ_CP183775
Coordinates   911093..912895 (+) Length   600 a.a.
NCBI ID   WP_226718790.1    Uniprot ID   -
Organism   Streptococcus mutans strain Xc     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 906093..917895
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V3C22_RS04335 (V3C22_04335) - 907295..907678 (-) 384 WP_002281981.1 DUF3021 family protein -
  V3C22_RS04340 (V3C22_04340) queF 907787..908275 (-) 489 WP_002265143.1 preQ(1) synthase -
  V3C22_RS04345 (V3C22_04345) queE 908288..909004 (-) 717 WP_002263289.1 7-carboxy-7-deazaguanine synthase QueE -
  V3C22_RS04350 (V3C22_04350) queD 909001..909447 (-) 447 WP_002266457.1 6-carboxytetrahydropterin synthase QueD -
  V3C22_RS04355 (V3C22_04355) queC 909447..910100 (-) 654 WP_088741840.1 7-cyano-7-deazaguanine synthase QueC -
  V3C22_RS04360 (V3C22_04360) rcrR 910655..911089 (+) 435 WP_002263292.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  V3C22_RS04365 (V3C22_04365) rcrP 911093..912895 (+) 1803 WP_226718790.1 ATP-binding cassette domain-containing protein Regulator
  V3C22_RS04370 (V3C22_04370) rcrQ 912885..914639 (+) 1755 WP_002275251.1 ABC transporter ATP-binding protein Regulator
  V3C22_RS04375 (V3C22_04375) tpx 914836..915321 (+) 486 WP_002267998.1 thiol peroxidase -
  V3C22_RS04380 (V3C22_04380) - 915482..915928 (+) 447 Protein_831 hypothetical protein -
  V3C22_RS04385 (V3C22_04385) - 916158..916781 (+) 624 WP_002268771.1 GTP pyrophosphokinase -
  V3C22_RS04390 (V3C22_04390) - 916782..917468 (+) 687 WP_002263646.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 66940.71 Da        Isoelectric Point: 9.6602

>NTDB_id=1105941 V3C22_RS04365 WP_226718790.1 911093..912895(+) (rcrP) [Streptococcus mutans strain Xc]
MFKIFKRLNAKEWGMVLLSTAFICLAVWMDLKTPEYMSNITTLLQTKGTTASDIMDPGSKMLMFSFGSFFMAVLVGFLAS
RTAASFTTRLRSDIFNRVMDYSEAEIKKFSIPSLLTRTTNDLTQLQIMIVMGMQVVTRGPIMAVWALTKIWGKSDEWTGA
VGVAVLIVFIMLSVLMFVAFPRQRQVQSLTDALNSTTRESLTGVRVVRAYNAEDYQDTKFKRENKNLTKLNLLVYRLMSL
MNPVMTVVSSGLTLAIYWIGAYLLNDIKIPMTSATAAKGAIADRISVFSDMVVFSSYAMQVVVGFMMMVAIFIILPRALV
SAKRINEVLALNSSVHFKEYSKADNARKGEVEFHDVSFRYSKNSRAVIEHVSFSAKAGETVAFIGSTGSGKSTLVNLIPR
FYDATEGWIKIDGIKVQNYSHDDLNNKVGYIPQRAVLFSGTIRSNIAFGQSDQAPLDDAKIWEALELAQAKDFVEEKEKG
LDTEVAQGGTNFSGGQKQRLAIARALARKPEILIFDDSFSALDYKTDRILRNDLAKKTKEMTKLIVAQRISTIMDADHIL
VLDQGKVVGQGTHKELLANNDIYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=1105941 V3C22_RS04365 WP_226718790.1 911093..912895(+) (rcrP) [Streptococcus mutans strain Xc]
ATGTTTAAAATTTTTAAACGTCTAAATGCTAAAGAATGGGGCATGGTTCTCCTTAGTACTGCCTTTATCTGTTTGGCTGT
CTGGATGGATTTGAAGACGCCCGAATATATGTCCAACATTACAACCTTGCTGCAGACTAAGGGAACGACCGCCTCAGATA
TTATGGATCCGGGATCTAAGATGCTCATGTTTTCATTTGGGAGCTTTTTTATGGCTGTTCTAGTTGGTTTTTTAGCTTCA
AGAACAGCTGCTAGCTTTACGACCCGTCTTCGATCTGATATTTTCAATCGAGTTATGGATTATTCAGAGGCGGAAATCAA
GAAATTTTCCATTCCCAGCCTTCTAACGCGTACGACTAATGATTTGACACAGTTGCAAATCATGATCGTTATGGGAATGC
AAGTGGTGACACGCGGTCCAATCATGGCTGTTTGGGCCTTGACTAAAATCTGGGGTAAAAGCGATGAATGGACAGGAGCA
GTCGGTGTTGCCGTTTTAATTGTCTTTATTATGCTGTCTGTTTTGATGTTTGTCGCTTTTCCAAGACAGCGTCAGGTGCA
GAGCTTGACGGATGCTCTAAATTCTACAACCCGTGAATCTCTGACTGGTGTTCGTGTTGTTCGGGCTTACAATGCAGAAG
ATTATCAGGACACTAAATTTAAGCGGGAAAATAAAAACCTGACGAAATTGAATTTATTGGTCTATCGTCTGATGTCGTTA
ATGAATCCTGTCATGACAGTTGTTTCCAGTGGTCTAACTTTAGCTATTTATTGGATTGGAGCTTACCTGCTCAATGATAT
TAAAATTCCTATGACGAGTGCGACAGCTGCTAAAGGAGCTATTGCTGATCGTATCAGTGTTTTTAGTGATATGGTTGTCT
TTTCATCTTATGCCATGCAGGTTGTTGTCGGTTTTATGATGATGGTCGCTATCTTTATCATTTTACCGCGTGCTTTAGTT
TCTGCCAAACGAATTAATGAAGTATTGGCGCTTAACTCATCTGTACACTTCAAAGAATATTCTAAAGCAGACAATGCTCG
AAAGGGAGAAGTCGAATTTCATGATGTATCGTTTCGTTACAGTAAAAATTCTCGTGCGGTTATTGAGCATGTGTCTTTCA
GTGCTAAAGCTGGTGAGACAGTTGCTTTTATTGGTTCCACTGGCTCAGGAAAATCAACTCTTGTTAATCTGATTCCTCGT
TTTTATGATGCTACAGAAGGTTGGATTAAGATAGATGGAATCAAAGTGCAAAATTACAGCCATGATGACCTCAACAATAA
AGTCGGCTATATTCCGCAAAGGGCAGTGCTTTTTAGTGGGACCATTCGTTCTAATATTGCATTTGGGCAAAGCGATCAAG
CGCCGCTTGATGATGCTAAAATTTGGGAGGCTCTTGAATTAGCCCAAGCCAAAGATTTTGTTGAAGAAAAAGAAAAGGGA
CTTGATACTGAGGTAGCTCAAGGCGGTACCAACTTCTCTGGCGGTCAAAAGCAACGCTTAGCTATTGCCCGTGCACTTGC
ACGCAAACCAGAAATTCTTATTTTTGATGACTCCTTCTCAGCTCTTGATTATAAGACGGATCGCATTCTGCGAAATGATT
TGGCAAAGAAAACCAAAGAAATGACTAAGTTGATTGTAGCCCAACGTATTTCAACTATTATGGATGCTGATCATATTTTG
GTCTTAGATCAAGGAAAGGTTGTTGGTCAAGGAACACACAAGGAATTACTGGCTAATAACGATATTTATCAAGAAATTGC
TTATTCACAACTATCTAAGGAGGAGTTAGAAAATGGAAAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(369-518)

ABC transporter transmembrane region (ABC_membrane)

(17-266)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

99.5

100

0.995

Multiple sequence alignment