Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   V3C22_RS04370 Genome accession   NZ_CP183775
Coordinates   912885..914639 (+) Length   584 a.a.
NCBI ID   WP_002275251.1    Uniprot ID   A0A829BLX6
Organism   Streptococcus mutans strain Xc     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 907885..919639
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V3C22_RS04345 (V3C22_04345) queE 908288..909004 (-) 717 WP_002263289.1 7-carboxy-7-deazaguanine synthase QueE -
  V3C22_RS04350 (V3C22_04350) queD 909001..909447 (-) 447 WP_002266457.1 6-carboxytetrahydropterin synthase QueD -
  V3C22_RS04355 (V3C22_04355) queC 909447..910100 (-) 654 WP_088741840.1 7-cyano-7-deazaguanine synthase QueC -
  V3C22_RS04360 (V3C22_04360) rcrR 910655..911089 (+) 435 WP_002263292.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  V3C22_RS04365 (V3C22_04365) rcrP 911093..912895 (+) 1803 WP_226718790.1 ATP-binding cassette domain-containing protein Regulator
  V3C22_RS04370 (V3C22_04370) rcrQ 912885..914639 (+) 1755 WP_002275251.1 ABC transporter ATP-binding protein Regulator
  V3C22_RS04375 (V3C22_04375) tpx 914836..915321 (+) 486 WP_002267998.1 thiol peroxidase -
  V3C22_RS04380 (V3C22_04380) - 915482..915928 (+) 447 Protein_831 hypothetical protein -
  V3C22_RS04385 (V3C22_04385) - 916158..916781 (+) 624 WP_002268771.1 GTP pyrophosphokinase -
  V3C22_RS04390 (V3C22_04390) - 916782..917468 (+) 687 WP_002263646.1 response regulator transcription factor -
  V3C22_RS04395 (V3C22_04395) - 917474..918706 (+) 1233 WP_002280909.1 sensor histidine kinase -
  V3C22_RS04400 (V3C22_04400) - 918763..919113 (-) 351 WP_002263648.1 DUF1304 domain-containing protein -

Sequence

Protein


Download         Length: 584 a.a.        Molecular weight: 64577.58 Da        Isoelectric Point: 5.7674

>NTDB_id=1105942 V3C22_RS04370 WP_002275251.1 912885..914639(+) (rcrQ) [Streptococcus mutans strain Xc]
MENKKKSLLSQMAPYLKGYKALFGLAVIFTIVSSTITVIGPDRLKEMTDTMTKGLAGKIDLDKIGEIALTLALLYFAGAL
VSYTASFIVSTLIQKFSQRLRNAIADKINKVPLKYFDSHSQGDTLSRVTNDVDLMTQSFNQSLVSMVAAIILLIGSIFMM
IKTNGALAATAILSVFAGFVVSTVIMAKSQPLFKKQQANLADVSGYVEEVYSGHNVVSSYNAIQQSKKQFENLNDQLFAS
MWKSQFFSGIMMPLMQFIGNFGYVMVCIVGATMAINGDITMGTIVAFMTYVRIFTQPIAQIAQGITQLQSANAAMGRVFE
FLDEEEIEDENHKVKQLEKVEGNVNFDNVFFGYSPDKTIIHDFSAHAKAGQKIAIVGPTGAGKTTIVNLLMRFYEVDRGM
ISIDGVNIHDMTREEVHDAFAMVLQDTWLFEGTVKENLIYNQKHITDEQVIAAAKAVGVHHFIKTLPKGYDTVLDDSVTL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQRAMDHLMEGRTSFVIAHRLSTIRNADLILVMRDGNIIEQGS
HDQLMAENGFYADLYNSQFTEEVA

Nucleotide


Download         Length: 1755 bp        

>NTDB_id=1105942 V3C22_RS04370 WP_002275251.1 912885..914639(+) (rcrQ) [Streptococcus mutans strain Xc]
ATGGAAAATAAGAAGAAATCATTATTAAGCCAAATGGCTCCTTACCTTAAAGGCTATAAGGCTTTATTTGGACTTGCTGT
CATTTTTACTATCGTTTCAAGTACGATTACTGTTATTGGACCTGACCGGCTGAAAGAGATGACAGATACCATGACCAAAG
GGCTGGCAGGAAAAATTGATTTAGATAAAATCGGTGAGATTGCTCTAACCTTGGCTCTCTTATACTTTGCTGGTGCTTTG
GTTTCTTATACTGCTAGCTTTATTGTGTCCACTTTGATTCAAAAGTTTTCGCAACGTCTGCGCAATGCCATTGCAGATAA
AATCAATAAGGTACCGCTCAAATATTTTGACAGCCATTCACAAGGAGATACCTTGTCTCGAGTGACCAATGATGTGGATT
TAATGACACAGTCTTTCAACCAAAGTTTAGTTTCAATGGTAGCAGCTATAATTCTCCTAATTGGCTCTATTTTCATGATG
ATTAAAACCAATGGAGCTCTTGCAGCGACCGCTATTTTGTCTGTTTTTGCTGGTTTTGTGGTATCCACTGTTATCATGGC
CAAGAGTCAGCCGCTTTTTAAAAAGCAACAAGCTAATCTAGCCGATGTCAGCGGTTATGTTGAAGAGGTCTATTCAGGTC
ATAATGTGGTTTCTAGTTACAATGCGATTCAGCAAAGCAAGAAGCAGTTTGAAAACTTGAATGACCAATTATTTGCAAGT
ATGTGGAAATCACAATTCTTTTCTGGAATTATGATGCCCCTTATGCAATTCATCGGAAATTTTGGGTATGTCATGGTCTG
TATTGTCGGTGCTACCATGGCTATTAACGGCGATATTACTATGGGAACGATTGTTGCCTTTATGACTTACGTCCGTATTT
TTACTCAGCCCATTGCGCAGATTGCTCAAGGAATCACTCAATTGCAATCAGCTAATGCTGCTATGGGACGTGTCTTTGAA
TTTCTTGATGAGGAAGAAATAGAAGACGAAAACCATAAAGTTAAACAACTTGAAAAAGTTGAAGGAAATGTTAATTTTGA
CAATGTTTTCTTTGGTTATAGTCCTGATAAAACTATTATTCATGATTTCTCGGCTCATGCTAAGGCTGGTCAAAAAATTG
CTATTGTGGGACCGACTGGTGCGGGTAAGACAACGATTGTTAACTTACTTATGCGTTTCTATGAGGTTGATAGAGGGATG
ATTTCTATTGATGGAGTTAATATCCATGATATGACACGAGAAGAAGTGCATGATGCTTTTGCCATGGTACTCCAAGATAC
TTGGCTCTTTGAAGGTACAGTTAAGGAAAATCTGATTTATAATCAAAAACATATTACTGATGAGCAAGTGATTGCAGCAG
CTAAGGCAGTTGGTGTTCATCATTTCATCAAGACTTTACCTAAGGGTTATGATACTGTTTTAGATGATTCGGTCACCTTA
TCAGTCGGTCAAAAACAACTCTTGACCATTGCGCGTGCTCTTCTTAAAGATGCACCGCTTCTGATTCTTGATGAAGCAAC
TTCCTCTGTTGATACTCGTACGGAAGAACTTATTCAAAGGGCTATGGATCATTTGATGGAGGGGCGGACATCATTCGTTA
TTGCCCATCGTCTGTCAACTATTCGCAATGCTGATCTTATTCTTGTCATGAGAGATGGTAATATTATTGAACAAGGCAGC
CATGACCAATTGATGGCAGAAAATGGCTTCTATGCCGATCTCTATAATAGTCAATTTACAGAAGAAGTGGCTTGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(361-508)

ABC transporter transmembrane region (ABC_membrane)

(24-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

99.658

100

0.997

Multiple sequence alignment