Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA/comEC   Type   Machinery gene
Locus tag   ACNS8M_RS09565 Genome accession   NZ_CP183239
Coordinates   2013938..2015479 (-) Length   513 a.a.
NCBI ID   WP_419224792.1    Uniprot ID   -
Organism   Acinetobacter sp. A2     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2008938..2020479
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNS8M_RS09540 (ACNS8M_09490) purM 2009238..2010308 (+) 1071 WP_168460155.1 phosphoribosylformylglycinamidine cyclo-ligase -
  ACNS8M_RS09545 (ACNS8M_09495) purN 2010319..2010948 (+) 630 WP_168460156.1 phosphoribosylglycinamide formyltransferase -
  ACNS8M_RS09550 (ACNS8M_09500) - 2011027..2011845 (-) 819 WP_419224789.1 alpha/beta fold hydrolase -
  ACNS8M_RS09555 (ACNS8M_09505) sppA 2011842..2012864 (-) 1023 WP_419224790.1 signal peptide peptidase SppA -
  ACNS8M_RS09560 (ACNS8M_09510) - 2012992..2013981 (+) 990 WP_419224791.1 lysophospholipid acyltransferase family protein -
  ACNS8M_RS09565 (ACNS8M_09515) comA/comEC 2013938..2015479 (-) 1542 WP_419224792.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  ACNS8M_RS09570 (ACNS8M_09520) - 2015603..2016466 (+) 864 WP_004679438.1 IS982 family transposase -
  ACNS8M_RS09575 (ACNS8M_09525) - 2016463..2017098 (-) 636 WP_419224793.1 ComEC/Rec2 family competence protein -
  ACNS8M_RS09580 (ACNS8M_09530) - 2017085..2017360 (-) 276 WP_216076196.1 hypothetical protein -
  ACNS8M_RS09585 (ACNS8M_09535) lolD 2017515..2018198 (-) 684 WP_168541745.1 lipoprotein-releasing ABC transporter ATP-binding protein LolD -
  ACNS8M_RS09590 (ACNS8M_09540) - 2018191..2019426 (-) 1236 WP_168417760.1 lipoprotein-releasing ABC transporter permease subunit -
  ACNS8M_RS09595 (ACNS8M_09545) - 2019452..2020024 (+) 573 WP_168460165.1 PilZ domain-containing protein -

Sequence

Protein


Download         Length: 513 a.a.        Molecular weight: 58566.83 Da        Isoelectric Point: 7.4974

>NTDB_id=1104748 ACNS8M_RS09565 WP_419224792.1 2013938..2015479(-) (comA/comEC) [Acinetobacter sp. A2]
MWMPRQYLLLLPFLSCVGLYTAFVGFEIPALRTLLMCSVVTIMLLLKQKISSFALLIYSAALLLYLDPLSVLSAAFWLSY
GACFILLRIYQSLHHQPKRIYFSRWQQFWQGFKILVESQWKIFIALLPLVIVFFKQVSWIAPLSNIVAIPFIGLVIVPLD
ILAGLSFFLFEPLSAVLFQLNDNLLALLLLIFRGIDALFVPQLSSIEMSAAVYICLCIGLLLLFLPQSVLPKTWAALCFV
PLILIDPQRQKFELVVLDVGQGQAVFLRSGSYSMMIDVGGYYDESKFSVGQQIIRPFLSVQGISTLDHVMLTHLDQDHSG
AFAYLKNEINIHKVSANQAVNVTENTQFEFCYQGQQWNLPYQVRIQVLSPKPSQLQYAAQQQNEYACVLHIHVPNAQPYQ
DFLLMADTGWATEYQILQDYPDLNVDVLILGHHGSKHSSAYDFLAHFRPKLAVASAGFDNRYGHPSPIVEQRLVDLNIPF
MYTAQHGSLRFYLDAPQRMLIQPYRQQKLWLQR

Nucleotide


Download         Length: 1542 bp        

>NTDB_id=1104748 ACNS8M_RS09565 WP_419224792.1 2013938..2015479(-) (comA/comEC) [Acinetobacter sp. A2]
TTGTGGATGCCCAGACAATACCTATTGTTGTTACCATTTTTAAGCTGTGTAGGGTTATACACGGCATTTGTCGGTTTCGA
AATTCCAGCACTCAGAACTTTGTTGATGTGCAGTGTCGTCACAATAATGTTGCTGCTGAAGCAAAAAATAAGCAGTTTTG
CCTTACTGATTTACAGCGCTGCTTTGTTGCTCTATTTAGATCCTTTGAGCGTATTGTCAGCAGCATTTTGGCTATCTTAT
GGTGCATGTTTTATTTTGCTGCGAATTTATCAGAGCCTGCATCATCAACCCAAACGTATTTATTTCAGTCGCTGGCAACA
ATTCTGGCAGGGCTTTAAAATTTTAGTTGAATCGCAATGGAAAATATTCATTGCCTTGTTACCACTGGTGATTGTGTTTT
TTAAGCAAGTCTCTTGGATTGCTCCTTTAAGCAATATCGTGGCCATTCCTTTCATTGGGTTAGTGATTGTACCCTTAGAT
ATTTTGGCAGGTCTTAGCTTTTTTCTATTTGAGCCATTGTCAGCAGTATTGTTTCAACTGAATGATAATTTACTGGCTTT
GTTGTTACTGATATTTCGAGGTATAGACGCTTTATTTGTACCACAGCTATCTAGCATCGAAATGTCGGCTGCAGTTTATA
TTTGTTTATGTATAGGGTTGTTGTTGCTGTTTTTACCACAATCAGTTTTGCCTAAGACTTGGGCTGCCTTATGCTTTGTA
CCCCTCATTTTAATTGACCCGCAACGACAAAAGTTTGAGTTGGTTGTGTTGGATGTCGGGCAAGGGCAAGCCGTATTTCT
GCGTTCTGGTTCGTACAGTATGATGATTGATGTGGGCGGATATTATGACGAAAGCAAGTTTAGTGTCGGGCAGCAGATTA
TACGTCCATTTTTATCTGTGCAGGGCATCAGTACGCTAGATCATGTAATGCTCACGCATTTAGACCAAGATCATAGCGGT
GCTTTTGCTTATTTGAAAAATGAAATCAATATCCATAAGGTTAGTGCCAATCAAGCGGTGAATGTGACTGAAAATACCCA
GTTTGAATTTTGTTACCAAGGGCAACAATGGAATTTACCATATCAAGTACGCATACAGGTACTCTCTCCAAAACCAAGTC
AGTTACAGTATGCCGCACAGCAGCAGAATGAATACGCTTGTGTGCTACATATTCATGTGCCAAATGCACAACCTTATCAG
GACTTTTTGCTGATGGCCGATACAGGCTGGGCAACTGAATATCAAATTTTACAGGATTATCCTGATTTAAACGTGGATGT
TTTAATTTTGGGGCATCATGGCAGTAAACACAGCTCTGCTTATGATTTTTTAGCACATTTTCGGCCTAAACTGGCTGTGG
CATCGGCAGGTTTTGACAATCGTTATGGGCATCCTAGCCCTATCGTTGAGCAACGTTTGGTCGATCTGAATATTCCATTC
ATGTATACGGCTCAGCATGGAAGTTTACGTTTTTATTTAGATGCGCCACAACGCATGCTTATACAGCCGTATCGGCAACA
GAAGTTGTGGCTGCAGCGTTAA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(258-336)

Competence protein (Competence)

(2-226)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/comEC Acinetobacter baylyi ADP1

50.685

99.61

0.505
  comA/comEC Acinetobacter baumannii strain A118

49.123

100

0.491
  comA/comEC Acinetobacter baumannii D1279779

49.123

100

0.491

Multiple sequence alignment