Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   ACNS8M_RS08825 Genome accession   NZ_CP183239
Coordinates   1853114..1853818 (+) Length   234 a.a.
NCBI ID   WP_167845925.1    Uniprot ID   -
Organism   Acinetobacter sp. A2     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1848114..1858818
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNS8M_RS08810 (ACNS8M_08760) - 1848302..1849606 (+) 1305 WP_419224736.1 IS4 family transposase -
  ACNS8M_RS08815 (ACNS8M_08765) clpB 1849662..1852241 (-) 2580 WP_168418987.1 ATP-dependent chaperone ClpB -
  ACNS8M_RS08820 (ACNS8M_08770) - 1852543..1852965 (-) 423 WP_168418988.1 OsmC family protein -
  ACNS8M_RS08825 (ACNS8M_08775) crp 1853114..1853818 (+) 705 WP_167845925.1 cAMP-activated global transcriptional regulator CRP Regulator
  ACNS8M_RS08830 (ACNS8M_08780) - 1854022..1855071 (+) 1050 WP_419224737.1 NADP(H)-dependent aldo-keto reductase -
  ACNS8M_RS08835 (ACNS8M_08785) - 1855267..1856049 (-) 783 WP_325781133.1 M48 family metallopeptidase -
  ACNS8M_RS08840 (ACNS8M_08790) - 1856206..1856514 (-) 309 WP_004971573.1 hypothetical protein -
  ACNS8M_RS08845 (ACNS8M_08795) - 1856753..1858072 (-) 1320 WP_004971574.1 adenylosuccinate synthase -

Sequence

Protein


Download         Length: 234 a.a.        Molecular weight: 26318.89 Da        Isoelectric Point: 4.6470

>NTDB_id=1104746 ACNS8M_RS08825 WP_167845925.1 1853114..1853818(+) (crp) [Acinetobacter sp. A2]
MTSNFSQLSTDALSPGQLPDSVKALLKRAYINRYPKRTTIVDAGTESKSLYLILKGSVSIILREDDDREIVVAYLNPGDF
FGEMGLFESNPQRTAEVRTRDVCEIAEITYENFHELSKQYPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LSAQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEEQGMIETDGKAILIFDASLEQNEATDGDFDDE

Nucleotide


Download         Length: 705 bp        

>NTDB_id=1104746 ACNS8M_RS08825 WP_167845925.1 1853114..1853818(+) (crp) [Acinetobacter sp. A2]
ATGACTTCAAACTTTTCGCAGCTTAGCACCGATGCATTGTCCCCAGGGCAACTGCCGGACTCGGTGAAAGCATTATTAAA
ACGTGCGTACATCAACCGTTATCCAAAACGGACAACTATTGTTGATGCGGGGACTGAATCTAAATCGTTGTATTTGATTT
TAAAAGGTTCAGTATCAATTATTCTTCGCGAAGATGATGATCGTGAAATTGTGGTTGCGTATTTGAATCCAGGTGACTTT
TTTGGGGAAATGGGCCTGTTTGAATCAAATCCACAACGTACTGCAGAAGTTCGTACACGTGATGTGTGTGAAATTGCGGA
AATTACATACGAAAATTTCCACGAACTTAGCAAACAATATCCAGATTTAAGCTATGCAGTATTTGCACAGTTGGTACGTC
GCCTAAAAAATACTACACGTAAAGTGACTGACCTTGCCTTTATTGATGTGTCTGGTCGTATTGCACGTTGTTTGATTGAC
CTTTCTGCACAGCCAGAAGCTATGATTTTACCAAATGGTCGTCAGATTCGCATTACACGTCAGGAAATTGGCCGTATTGT
GGGTTGTTCACGTGAAATGGTTGGTCGTGTACTGAAAACGCTTGAAGAGCAAGGCATGATTGAAACTGATGGTAAAGCCA
TTCTAATTTTTGATGCTTCTTTGGAGCAAAATGAAGCCACTGATGGCGACTTTGATGACGAATAA

Domains

Predicted by InterproScan.

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)

Bacterial regulatory proteins, crp family (Crp)

(176-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

92.308

100

0.923
  crp Vibrio cholerae strain A1552

47.317

87.607

0.415
  crp Haemophilus influenzae Rd KW20

47.692

83.333

0.397

Multiple sequence alignment