Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGG   Type   Machinery gene
Locus tag   ACN2AT_RS12525 Genome accession   NZ_CP183238
Coordinates   2445107..2445481 (-) Length   124 a.a.
NCBI ID   WP_003230170.1    Uniprot ID   A0AAE2SIW8
Organism   Bacillus subtilis strain NDmed     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2440107..2450481
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN2AT_RS12485 (ACN2AT_12390) yqhG 2440439..2441233 (+) 795 WP_003230200.1 YqhG family protein -
  ACN2AT_RS12490 (ACN2AT_12395) sinI 2441416..2441589 (+) 174 WP_003230187.1 anti-repressor SinI Regulator
  ACN2AT_RS12495 (ACN2AT_12400) sinR 2441623..2441958 (+) 336 WP_003226345.1 transcriptional regulator SinR Regulator
  ACN2AT_RS12500 (ACN2AT_12405) tasA 2442051..2442836 (-) 786 WP_004398632.1 biofilm matrix protein TasA -
  ACN2AT_RS12505 (ACN2AT_12410) sipW 2442900..2443472 (-) 573 WP_003246088.1 signal peptidase I SipW -
  ACN2AT_RS12510 (ACN2AT_12415) tapA 2443456..2444217 (-) 762 WP_004399106.1 amyloid fiber anchoring/assembly protein TapA -
  ACN2AT_RS12515 (ACN2AT_12420) yqzG 2444489..2444815 (+) 327 WP_003246051.1 YqzG/YhdC family protein -
  ACN2AT_RS12520 (ACN2AT_12425) spoIITA 2444857..2445036 (-) 180 WP_003230176.1 YqzE family protein -
  ACN2AT_RS12525 (ACN2AT_12430) comGG 2445107..2445481 (-) 375 WP_003230170.1 ComG operon protein ComGG Machinery gene
  ACN2AT_RS12530 (ACN2AT_12435) comGF 2445482..2445865 (-) 384 WP_003230168.1 ComG operon protein ComGF Machinery gene
  ACN2AT_RS12535 (ACN2AT_12440) comGE 2445891..2446238 (-) 348 WP_003230165.1 ComG operon protein 5 Machinery gene
  ACN2AT_RS12540 (ACN2AT_12445) comGD 2446222..2446653 (-) 432 WP_004398628.1 comG operon protein ComGD Machinery gene
  ACN2AT_RS12545 (ACN2AT_12450) comGC 2446643..2446939 (-) 297 WP_003230162.1 comG operon protein ComGC Machinery gene
  ACN2AT_RS12550 (ACN2AT_12455) comGB 2446953..2447990 (-) 1038 WP_009967727.1 comG operon protein ComGB Machinery gene
  ACN2AT_RS12555 (ACN2AT_12460) comGA 2447977..2449047 (-) 1071 WP_004399124.1 competence protein ComGA Machinery gene
  ACN2AT_RS12560 (ACN2AT_12465) corA 2449459..2450412 (-) 954 WP_004399136.1 magnesium transporter CorA -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14539.79 Da        Isoelectric Point: 9.2806

>NTDB_id=1104680 ACN2AT_RS12525 WP_003230170.1 2445107..2445481(-) (comGG) [Bacillus subtilis strain NDmed]
MYRTRGFIYPAVLFVSALVLLIVNFVAAQYISRCMFEKETKELYIGENLLQNGVLLSIRHVLEERKGQEGTQQFLYGRVS
YYIHDTSIKEQKEINLRVSTDSGTERTAQIVFDQKQKKLLRWTE

Nucleotide


Download         Length: 375 bp        

>NTDB_id=1104680 ACN2AT_RS12525 WP_003230170.1 2445107..2445481(-) (comGG) [Bacillus subtilis strain NDmed]
ATGTATCGTACAAGAGGGTTTATTTATCCAGCTGTTCTTTTTGTGTCAGCGCTTGTGCTGTTAATCGTGAACTTTGTTGC
TGCTCAATATATTTCACGCTGCATGTTTGAGAAGGAAACAAAAGAGTTATACATAGGAGAGAATTTGCTTCAAAATGGGG
TGCTTCTTTCGATTCGGCATGTTCTAGAGGAACGGAAAGGCCAGGAGGGTACGCAGCAATTTCTATATGGACGGGTTTCT
TATTACATTCATGATACATCGATAAAAGAACAAAAAGAAATCAACTTAAGAGTGTCAACGGATTCGGGAACAGAAAGAAC
TGCACAGATCGTGTTTGACCAAAAACAGAAAAAACTGCTGAGATGGACAGAATAA

Domains

Predicted by InterproScan.

ComG operon protein 7 (ComGG)

(30-124)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGG Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment