Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | ACN2AT_RS12495 | Genome accession | NZ_CP183238 |
| Coordinates | 2441623..2441958 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis strain NDmed | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2436623..2446958
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACN2AT_RS12475 (ACN2AT_12380) | gcvT | 2437215..2438303 (-) | 1089 | WP_004398598.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| ACN2AT_RS12480 (ACN2AT_12385) | hepAA | 2438745..2440418 (+) | 1674 | WP_004398544.1 | DEAD/DEAH box helicase | - |
| ACN2AT_RS12485 (ACN2AT_12390) | yqhG | 2440439..2441233 (+) | 795 | WP_003230200.1 | YqhG family protein | - |
| ACN2AT_RS12490 (ACN2AT_12395) | sinI | 2441416..2441589 (+) | 174 | WP_003230187.1 | anti-repressor SinI | Regulator |
| ACN2AT_RS12495 (ACN2AT_12400) | sinR | 2441623..2441958 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| ACN2AT_RS12500 (ACN2AT_12405) | tasA | 2442051..2442836 (-) | 786 | WP_004398632.1 | biofilm matrix protein TasA | - |
| ACN2AT_RS12505 (ACN2AT_12410) | sipW | 2442900..2443472 (-) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| ACN2AT_RS12510 (ACN2AT_12415) | tapA | 2443456..2444217 (-) | 762 | WP_004399106.1 | amyloid fiber anchoring/assembly protein TapA | - |
| ACN2AT_RS12515 (ACN2AT_12420) | yqzG | 2444489..2444815 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| ACN2AT_RS12520 (ACN2AT_12425) | spoIITA | 2444857..2445036 (-) | 180 | WP_003230176.1 | YqzE family protein | - |
| ACN2AT_RS12525 (ACN2AT_12430) | comGG | 2445107..2445481 (-) | 375 | WP_003230170.1 | ComG operon protein ComGG | Machinery gene |
| ACN2AT_RS12530 (ACN2AT_12435) | comGF | 2445482..2445865 (-) | 384 | WP_003230168.1 | ComG operon protein ComGF | Machinery gene |
| ACN2AT_RS12535 (ACN2AT_12440) | comGE | 2445891..2446238 (-) | 348 | WP_003230165.1 | ComG operon protein 5 | Machinery gene |
| ACN2AT_RS12540 (ACN2AT_12445) | comGD | 2446222..2446653 (-) | 432 | WP_004398628.1 | comG operon protein ComGD | Machinery gene |
| ACN2AT_RS12545 (ACN2AT_12450) | comGC | 2446643..2446939 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=1104679 ACN2AT_RS12495 WP_003226345.1 2441623..2441958(+) (sinR) [Bacillus subtilis strain NDmed]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=1104679 ACN2AT_RS12495 WP_003226345.1 2441623..2441958(+) (sinR) [Bacillus subtilis strain NDmed]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |