Detailed information NTG0110284

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: ACAK32_RS17720
• Genome accession: NZ_AP031580
• Coordinates: 3697994..3698476 (-)
• Length: 160 a.a.
• NCBI ID: WP_001046420.1
• Uniprot ID: A0A7U3Y2Y6
• Organism: Acinetobacter baumannii strain JUNP419
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3692994..3703476

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACAK32_RS17685 (JUNP419_3551)	-	3693100..3694134 (+)	1035	WP_001189447.1	lipase secretion chaperone	-
ACAK32_RS17690 (JUNP419_3552)	-	3694249..3695190 (+)	942	WP_085916958.1	triacylglycerol lipase	-
ACAK32_RS17695 (JUNP419_3553)	rplS	3695243..3695611 (-)	369	WP_000014562.1	50S ribosomal protein L19	-
ACAK32_RS17700 (JUNP419_3554)	trmD	3695820..3696560 (-)	741	WP_000464598.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
ACAK32_RS17705 (JUNP419_3555)	rimM	3696606..3697154 (-)	549	WP_000189236.1	ribosome maturation factor RimM	-
ACAK32_RS17710 (JUNP419_3556)	rpsP	3697174..3697425 (-)	252	WP_000260334.1	30S ribosomal protein S16	-
ACAK32_RS17715 (JUNP419_3557)	pilE	3697572..3697997 (-)	426	WP_000788342.1	type IV pilin protein	Machinery gene
ACAK32_RS17720 (JUNP419_3558)	pilY2	3697994..3698476 (-)	483	WP_001046420.1	type IV pilin protein	Machinery gene
ACAK32_RS17725 (JUNP419_3559)	pilY1	3698489..3702343 (-)	3855	WP_000768970.1	PilC/PilY family type IV pilus protein	Machinery gene
ACAK32_RS17730 (JUNP419_3560)	pilX	3702355..3703173 (-)	819	WP_000149374.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17548.77 Da
• Isoelectric Point: 8.4817

>NTDB_id=110284 ACAK32_RS17720 WP_001046420.1 3697994..3698476(-) (pilY2) [Acinetobacter baumannii strain JUNP419]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSASNGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ

Nucleotide

• Length: 483 bp

>NTDB_id=110284 ACAK32_RS17720 WP_001046420.1 3697994..3698476(-) (pilY2) [Acinetobacter baumannii strain JUNP419]
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTTCTAATGGTCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-135)

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

3D structure

• AlphaFold DB: A0A7U3Y2Y6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	97.5	100	0.975
comE	Acinetobacter baylyi ADP1	40.116	100	0.431