Detailed information
Bioinformatically predicted
Overview
| Name | Cj0011c | Type | Machinery gene |
| Locus tag | ACM66T_RS11815 | Genome accession | NZ_CP182225 |
| Coordinates | 2291350..2291601 (-) | Length | 83 a.a. |
| NCBI ID | WP_416768584.1 | Uniprot ID | - |
| Organism | Sulfurimonas sp. ST-25 | ||
| Function | DNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2286350..2296601
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACM66T_RS11780 (ACM66T_11780) | - | 2286371..2286541 (+) | 171 | WP_231019210.1 | hypothetical protein | - |
| ACM66T_RS11785 (ACM66T_11785) | - | 2286552..2287031 (-) | 480 | WP_231019211.1 | hypothetical protein | - |
| ACM66T_RS11790 (ACM66T_11790) | - | 2287028..2287612 (-) | 585 | WP_231019212.1 | C40 family peptidase | - |
| ACM66T_RS11795 (ACM66T_11795) | - | 2287629..2288645 (-) | 1017 | WP_231019213.1 | aldo/keto reductase | - |
| ACM66T_RS11800 (ACM66T_11800) | - | 2288681..2289571 (-) | 891 | WP_231019214.1 | DUF234 domain-containing protein | - |
| ACM66T_RS11805 (ACM66T_11805) | - | 2289599..2289784 (-) | 186 | WP_416768583.1 | hypothetical protein | - |
| ACM66T_RS11810 (ACM66T_11810) | aguB | 2289858..2290709 (-) | 852 | WP_231019216.1 | N-carbamoylputrescine amidase | - |
| ACM66T_RS11815 (ACM66T_11815) | Cj0011c | 2291350..2291601 (-) | 252 | WP_416768584.1 | ComEA family DNA-binding protein | Machinery gene |
| ACM66T_RS11820 (ACM66T_11820) | - | 2291767..2292228 (+) | 462 | WP_231019217.1 | hypothetical protein | - |
| ACM66T_RS11825 (ACM66T_11825) | - | 2292318..2293604 (-) | 1287 | WP_416768932.1 | sugar transferase | - |
| ACM66T_RS11830 (ACM66T_11830) | - | 2293738..2295099 (-) | 1362 | WP_231019220.1 | phosphomannomutase/phosphoglucomutase | - |
| ACM66T_RS11835 (ACM66T_11835) | - | 2295110..2296489 (-) | 1380 | WP_231019221.1 | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | - |
Sequence
Protein
Download Length: 83 a.a. Molecular weight: 8978.57 Da Isoelectric Point: 8.5851
>NTDB_id=1100889 ACM66T_RS11815 WP_416768584.1 2291350..2291601(-) (Cj0011c) [Sulfurimonas sp. ST-25]
MGFMKKTAAVLAALVISIPLFAGVNLNTATAEELSSLKGIGPATAAKIIEYRKEHRFNSIEDIMNVKGVGEKTFLKIKDD
LEV
MGFMKKTAAVLAALVISIPLFAGVNLNTATAEELSSLKGIGPATAAKIIEYRKEHRFNSIEDIMNVKGVGEKTFLKIKDD
LEV
Nucleotide
Download Length: 252 bp
>NTDB_id=1100889 ACM66T_RS11815 WP_416768584.1 2291350..2291601(-) (Cj0011c) [Sulfurimonas sp. ST-25]
ATGGGATTCATGAAGAAAACCGCAGCGGTGCTTGCCGCGCTGGTGATCAGCATACCTCTGTTCGCGGGGGTCAACCTCAA
CACGGCGACGGCGGAGGAGTTGTCCAGTCTCAAGGGGATCGGCCCGGCGACGGCGGCGAAGATCATTGAGTACCGCAAAG
AGCACCGCTTTAACAGCATCGAGGATATCATGAACGTCAAGGGGGTGGGCGAAAAAACCTTCCTGAAGATCAAGGATGAT
CTCGAGGTCTAA
ATGGGATTCATGAAGAAAACCGCAGCGGTGCTTGCCGCGCTGGTGATCAGCATACCTCTGTTCGCGGGGGTCAACCTCAA
CACGGCGACGGCGGAGGAGTTGTCCAGTCTCAAGGGGATCGGCCCGGCGACGGCGGCGAAGATCATTGAGTACCGCAAAG
AGCACCGCTTTAACAGCATCGAGGATATCATGAACGTCAAGGGGGTGGGCGAAAAAACCTTCCTGAAGATCAAGGATGAT
CTCGAGGTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| Cj0011c | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
52.5 |
96.386 |
0.506 |
| comEA | Bacillus subtilis subsp. subtilis str. 168 |
55.738 |
73.494 |
0.41 |
| comEA | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
52.632 |
68.675 |
0.361 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
51.724 |
69.88 |
0.361 |