Detailed information NTG1100401

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ACMDCT_RS14860
• Genome accession: NZ_CP182108
• Coordinates: 3216839..3218212 (-)
• Length: 457 a.a.
• NCBI ID: WP_416633759.1
• Uniprot ID: -
• Organism: Salicola sp. KBTZ08
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3211839..3223212

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMDCT_RS14845 (ACMDCT_14845)	-	3212429..3215635 (+)	3207	WP_416633756.1	pilus assembly protein	-
ACMDCT_RS14850 (ACMDCT_14850)	-	3215644..3216087 (+)	444	WP_416633757.1	type IV pilin protein	-
ACMDCT_RS14855 (ACMDCT_14855)	-	3216176..3216733 (-)	558	WP_416633758.1	GspH/FimT family protein	-
ACMDCT_RS14860 (ACMDCT_14860)	pilR	3216839..3218212 (-)	1374	WP_416633759.1	sigma-54-dependent transcriptional regulator	Regulator
ACMDCT_RS14865 (ACMDCT_14865)	-	3218209..3219852 (-)	1644	WP_416633760.1	sensor histidine kinase	-
ACMDCT_RS14870 (ACMDCT_14870)	-	3219938..3221560 (+)	1623	WP_416633761.1	NAD+ synthase	-
ACMDCT_RS14875 (ACMDCT_14875)	-	3221567..3222454 (-)	888	WP_416633762.1	outer membrane protein assembly factor BamD	-

Sequence

Protein

• Length: 457 a.a.
• Molecular weight: 50334.01 Da
• Isoelectric Point: 4.6419

>NTDB_id=1100401 ACMDCT_RS14860 WP_416633759.1 3216839..3218212(-) (pilR) [Salicola sp. KBTZ08]
MSDYKALIVDDEPDIRELLDITLSRMAIECTTAATLGEARDLLASQPFHLCLTDMSLPDGNGIDLVEWMQNQYPAIPVAV
ITAYGCMDSAITALKTGAFDFVSKPVELPRLRELVESALRLPSESGNDEPPETAPEDDGKLLGESPQIEALRRQARKVAR
SQAPVYISGESGSGKELVARLIHEHGPRRDHPFVPVNCGAIPQELMESEFFGHRKGSFTGATENKDGLFQAAHQGTLFLD
EVADLPMPMQVKLLRAIQEKRIRPVGAKDETAVDVRLLSATHHNLAALVEEGLFRQDLFYRINVIELRVPSLRERATDIP
ILARHILGRLARDYDLPPAQLSDNALTALQAHPFPGNVRELENCLERAFTLSEDDVIHAEDLQLGGGPSTAGDTRDSTDF
PDPAESGMDLESYLESIERATLEKALEQTDGNKTAAARQLGISFRALRYKLKKLGMD

Nucleotide

• Length: 1374 bp

>NTDB_id=1100401 ACMDCT_RS14860 WP_416633759.1 3216839..3218212(-) (pilR) [Salicola sp. KBTZ08]
ATGAGCGACTACAAGGCGTTGATCGTTGATGACGAACCGGACATCCGGGAACTGCTCGACATCACTCTCAGCCGCATGGC
CATTGAGTGCACCACGGCCGCAACACTGGGCGAGGCGCGCGACCTGCTCGCCAGCCAGCCCTTCCACCTCTGCCTGACCG
ACATGAGTCTGCCGGATGGCAACGGCATCGACCTTGTGGAGTGGATGCAGAACCAGTATCCGGCAATACCGGTTGCCGTC
ATTACCGCCTACGGCTGCATGGACTCCGCCATAACGGCATTAAAGACCGGCGCGTTTGACTTTGTCTCCAAGCCCGTGGA
GCTGCCGCGCCTGCGGGAACTGGTCGAGAGCGCGCTGCGGTTGCCCTCGGAAAGCGGCAACGATGAACCACCCGAAACCG
CCCCCGAGGACGACGGCAAGCTCCTCGGCGAATCCCCACAGATCGAGGCGCTTAGGCGCCAGGCACGGAAGGTGGCGCGC
AGCCAGGCGCCGGTCTACATCAGCGGGGAGTCCGGAAGCGGCAAGGAACTGGTCGCGCGCCTGATCCATGAGCACGGGCC
CCGTCGTGACCACCCTTTTGTACCGGTCAACTGCGGCGCCATTCCCCAGGAATTGATGGAGAGCGAGTTCTTCGGCCACC
GCAAGGGCAGCTTCACCGGCGCCACCGAGAACAAGGATGGCCTTTTCCAGGCCGCCCACCAGGGCACCCTTTTCCTGGAC
GAAGTAGCGGACCTGCCCATGCCCATGCAGGTCAAGCTGTTGCGCGCGATCCAGGAGAAGCGCATCCGCCCGGTAGGGGC
CAAGGATGAAACCGCCGTGGATGTCCGACTGCTGAGCGCCACCCACCACAACCTGGCGGCATTGGTGGAAGAGGGCCTGT
TCCGTCAGGACCTGTTCTACCGCATCAACGTGATTGAACTCAGGGTTCCCTCGCTGCGCGAACGCGCCACCGACATCCCG
ATCCTGGCCCGGCACATCCTCGGGCGCCTGGCACGGGACTATGACCTGCCACCGGCGCAACTCAGCGACAACGCCCTCAC
CGCGCTCCAGGCACACCCGTTCCCGGGAAACGTACGGGAGTTGGAGAACTGCCTGGAACGGGCCTTCACACTGAGTGAGG
ACGACGTGATCCACGCCGAGGACCTCCAGCTGGGAGGCGGCCCCTCAACAGCTGGGGATACCAGGGACAGCACGGACTTC
CCCGACCCCGCCGAAAGCGGCATGGACCTGGAGTCTTACCTGGAATCCATTGAGCGCGCCACCCTTGAAAAAGCGCTGGA
ACAGACCGACGGCAACAAGACCGCCGCCGCCCGCCAGCTGGGGATCAGCTTCCGGGCCCTGCGGTATAAGCTCAAGAAAC
TGGGTATGGATTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (7-115)

• Sigma-54 interaction domain (Sigma54_activat) (141-307)

• Bacterial regulatory protein, Fis family (HTH_8) (414-454)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	63.895	100	0.639
pilR	Acinetobacter baumannii strain A118	49.351	100	0.499