Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ABXS94_RS03930 Genome accession   NZ_AP031566
Coordinates   852171..852554 (+) Length   127 a.a.
NCBI ID   WP_004975524.1    Uniprot ID   A0A1E8E5G7
Organism   Acinetobacter towneri strain PT23-B2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 847171..857554
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABXS94_RS03920 (PT23B2_07600) - 850067..851200 (-) 1134 WP_353675578.1 efflux RND transporter periplasmic adaptor subunit -
  ABXS94_RS03925 (PT23B2_07610) - 851250..851894 (-) 645 WP_004975522.1 hypothetical protein -
  ABXS94_RS03930 (PT23B2_07620) pilG 852171..852554 (+) 384 WP_004975524.1 twitching motility response regulator PilG Regulator
  ABXS94_RS03935 (PT23B2_07630) - 852587..852955 (+) 369 WP_004975526.1 response regulator -
  ABXS94_RS03940 (PT23B2_07640) - 852959..853495 (+) 537 WP_004975527.1 chemotaxis protein CheW -
  ABXS94_RS03945 (PT23B2_07650) - 853542..855617 (+) 2076 WP_346791920.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14243.30 Da        Isoelectric Point: 4.7172

>NTDB_id=110002 ABXS94_RS03930 WP_004975524.1 852171..852554(+) (pilG) [Acinetobacter towneri strain PT23-B2]
MDDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVVTAVDGFEALSKIAESNPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVTA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=110002 ABXS94_RS03930 WP_004975524.1 852171..852554(+) (pilG) [Acinetobacter towneri strain PT23-B2]
ATGGACGATAAATTCCAAAATCTAAAAGTCATGGTGATTGATGATTCAAAAACCATTCGCCGTACAGCTGAAACACTTCT
ACAGCGTGAAGGTTGTGAAGTGGTTACCGCAGTTGATGGATTTGAAGCTTTATCCAAAATTGCCGAATCAAATCCAGATA
TCGTATTCGTAGATATTATGATGCCACGCCTAGATGGTTACCAAACGTGTGCCTTAATTAAAAACTCGCAAAACTACCAA
AACATTCCTGTCATTATGCTATCAAGTAAAGATGGTTTATTTGACCAAGCCAAAGGACGTGTAGTAGGTTCTGATGAGTA
TCTGACTAAACCATTTAGTAAAGATGAATTATTAAACGCCATTCGTAACCACGTGACAGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1E8E5G7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

95.276

100

0.953
  vicR Streptococcus mutans UA159

41.88

92.126

0.386
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment