Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | ABXS94_RS02830 | Genome accession | NZ_AP031566 |
| Coordinates | 613439..613789 (+) | Length | 116 a.a. |
| NCBI ID | WP_353675506.1 | Uniprot ID | - |
| Organism | Acinetobacter towneri strain PT23-B2 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 608439..618789
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABXS94_RS02810 (PT23B2_05420) | bamB | 608825..609973 (+) | 1149 | WP_096901518.1 | outer membrane protein assembly factor BamB | - |
| ABXS94_RS02815 (PT23B2_05430) | der | 610192..611604 (+) | 1413 | WP_004975107.1 | ribosome biogenesis GTPase Der | - |
| ABXS94_RS02820 (PT23B2_05440) | - | 611697..612470 (-) | 774 | WP_353675504.1 | SDR family oxidoreductase | - |
| ABXS94_RS02825 (PT23B2_05450) | mazG | 612578..613342 (+) | 765 | WP_353675505.1 | nucleoside triphosphate pyrophosphohydrolase | - |
| ABXS94_RS02830 (PT23B2_05460) | comEA | 613439..613789 (+) | 351 | WP_353675506.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| ABXS94_RS02835 (PT23B2_05470) | pcnB | 613920..615380 (+) | 1461 | WP_168461623.1 | polynucleotide adenylyltransferase PcnB | - |
| ABXS94_RS02840 (PT23B2_05480) | folK | 615377..615865 (+) | 489 | WP_353675507.1 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | - |
| ABXS94_RS02845 (PT23B2_05490) | panB | 615915..616724 (+) | 810 | WP_004975120.1 | 3-methyl-2-oxobutanoate hydroxymethyltransferase | - |
| ABXS94_RS02850 (PT23B2_05500) | panC | 616726..617571 (+) | 846 | WP_131260754.1 | pantoate--beta-alanine ligase | - |
| ABXS94_RS02855 (PT23B2_05510) | rapZ | 617596..618447 (+) | 852 | WP_004975124.1 | RNase adapter RapZ | - |
| ABXS94_RS02860 (PT23B2_05520) | - | 618444..618713 (+) | 270 | WP_026438354.1 | HPr family phosphocarrier protein | - |
Sequence
Protein
Download Length: 116 a.a. Molecular weight: 13072.93 Da Isoelectric Point: 10.4236
>NTDB_id=109998 ABXS94_RS02830 WP_353675506.1 613439..613789(+) (comEA) [Acinetobacter towneri strain PT23-B2]
MSLPVTAQQFDQNYLKWKAQQEAQDQRLTVKQTPAATSQYYLARPTQQVSSSVQQVRLNSASLEQLQQLSGIGLKKAEAI
VEYRKQKGQFQSIEELQQVKGIGPALFAKNKHKLAL
MSLPVTAQQFDQNYLKWKAQQEAQDQRLTVKQTPAATSQYYLARPTQQVSSSVQQVRLNSASLEQLQQLSGIGLKKAEAI
VEYRKQKGQFQSIEELQQVKGIGPALFAKNKHKLAL
Nucleotide
Download Length: 351 bp
>NTDB_id=109998 ABXS94_RS02830 WP_353675506.1 613439..613789(+) (comEA) [Acinetobacter towneri strain PT23-B2]
ATGAGTCTTCCCGTAACGGCACAGCAGTTCGACCAAAATTATTTAAAATGGAAAGCGCAGCAAGAAGCGCAAGATCAGCG
TTTGACTGTAAAGCAAACACCTGCTGCCACATCACAATATTATTTAGCACGTCCGACGCAACAAGTAAGTTCTAGTGTGC
AGCAAGTCCGTTTGAATAGTGCATCTCTAGAGCAACTGCAACAACTGTCAGGGATTGGCTTGAAAAAGGCTGAAGCGATT
GTGGAATATCGTAAACAAAAGGGACAGTTTCAAAGTATCGAAGAGTTACAGCAGGTGAAAGGCATTGGCCCTGCATTATT
TGCCAAAAATAAACACAAACTGGCGCTGTAG
ATGAGTCTTCCCGTAACGGCACAGCAGTTCGACCAAAATTATTTAAAATGGAAAGCGCAGCAAGAAGCGCAAGATCAGCG
TTTGACTGTAAAGCAAACACCTGCTGCCACATCACAATATTATTTAGCACGTCCGACGCAACAAGTAAGTTCTAGTGTGC
AGCAAGTCCGTTTGAATAGTGCATCTCTAGAGCAACTGCAACAACTGTCAGGGATTGGCTTGAAAAAGGCTGAAGCGATT
GTGGAATATCGTAAACAAAAGGGACAGTTTCAAAGTATCGAAGAGTTACAGCAGGTGAAAGGCATTGGCCCTGCATTATT
TGCCAAAAATAAACACAAACTGGCGCTGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Acinetobacter baylyi ADP1 |
50.893 |
96.552 |
0.491 |
| comEA | Acinetobacter baumannii strain A118 |
47.414 |
100 |
0.474 |
| comEA | Acinetobacter baumannii D1279779 |
46.552 |
100 |
0.466 |