Detailed information NTG0109985

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ABXS94_RS01025
• Genome accession: NZ_AP031566
• Coordinates: 238838..240271 (-)
• Length: 477 a.a.
• NCBI ID: WP_353675398.1
• Uniprot ID: -
• Organism: Acinetobacter towneri strain PT23-B2
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 233838..245271

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABXS94_RS01010 (PT23B2_01940)	lptG	234838..235908 (+)	1071	WP_353675395.1	LPS export ABC transporter permease LptG	-
ABXS94_RS01015 (PT23B2_01950)	gpmI	236053..237600 (+)	1548	WP_353675396.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
ABXS94_RS01020 (PT23B2_01960)	-	237619..238788 (+)	1170	WP_353675397.1	S41 family peptidase	-
ABXS94_RS01025 (PT23B2_01970)	pilR	238838..240271 (-)	1434	WP_353675398.1	sigma-54 dependent transcriptional regulator	Regulator
ABXS94_RS01030 (PT23B2_01980)	pilS	240341..241903 (-)	1563	WP_353675399.1	ATP-binding protein	Regulator
ABXS94_RS01035 (PT23B2_01990)	-	241944..242579 (-)	636	WP_004975702.1	response regulator	-
ABXS94_RS01040 (PT23B2_02000)	-	242795..243886 (+)	1092	WP_286396891.1	serine hydrolase	-

Sequence

Protein

• Length: 477 a.a.
• Molecular weight: 53712.66 Da
• Isoelectric Point: 6.1210

>NTDB_id=109985 ABXS94_RS01025 WP_353675398.1 238838..240271(-) (pilR) [Acinetobacter towneri strain PT23-B2]
MHAVQPLVLLVDDEEDLCTLMQMTLARMGIQTHVAYRLAQAKQLLAEHQYDACLTDLNLPDGNGLQLVEWISEQYPNVPV
AVLTAYGNMDIAIAALKAGAFDFVSKPVNQIHLQQLLEKALNKPFDTTDHHSQDQLEYKMLIGQSLPIQQLRSTIKKIAR
SQAPVFITGESGTGKEVVANLVHRLSNRNEGPFIAINCGAIPTELMESELFGHKKGSFTGATQDKQGLIQSAHGGSLFLD
EIAELPLSMQVKLLRAVQEKRIRPVGSDSEIDVDFRVISASHQDLESLVQQGRFRQDLFFRIHVMDLVLPALRERGQDIL
LLADHFIQKVAQEWDIPAKQLTPRAQQFLLEQYYPGNVRELRNIIERAITLSDDDVIDLKHLQTAPLRQFSMSNTATTEP
QPTAETPQQIVTDVLLTGRKLPKEGLEAYLEKVEKDILLNALHLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDTEDE

Nucleotide

• Length: 1434 bp

>NTDB_id=109985 ABXS94_RS01025 WP_353675398.1 238838..240271(-) (pilR) [Acinetobacter towneri strain PT23-B2]
ATGCACGCTGTTCAACCTTTGGTTTTATTGGTCGATGACGAAGAAGACCTTTGTACCCTCATGCAGATGACTTTGGCACG
TATGGGGATTCAAACCCATGTCGCGTATCGTTTAGCACAAGCCAAGCAATTATTGGCAGAACATCAGTACGATGCTTGCT
TAACCGACTTAAACCTGCCCGATGGCAATGGCTTGCAACTGGTTGAATGGATTTCCGAACAATATCCGAATGTGCCTGTT
GCCGTATTGACCGCTTACGGCAATATGGATATTGCGATTGCTGCTTTAAAAGCAGGTGCATTTGACTTTGTCAGCAAGCC
TGTCAATCAAATACATTTACAGCAACTCCTTGAAAAAGCACTGAATAAACCTTTCGACACCACCGATCATCACAGCCAAG
ATCAGCTTGAATATAAAATGTTGATTGGGCAATCTTTGCCTATTCAGCAATTGCGCAGCACCATCAAAAAAATTGCGCGC
TCGCAAGCGCCTGTATTTATTACAGGCGAATCAGGTACGGGGAAAGAAGTTGTCGCCAATTTGGTTCACCGTTTAAGTAA
CCGCAACGAAGGACCATTTATTGCAATTAACTGTGGTGCAATCCCCACCGAACTCATGGAAAGCGAGCTATTTGGACACA
AAAAAGGTAGCTTTACAGGAGCGACTCAAGACAAACAAGGTCTGATTCAATCTGCACATGGTGGCAGCTTATTTTTAGAT
GAAATTGCCGAACTGCCACTGAGCATGCAAGTCAAACTGCTGCGTGCCGTTCAGGAAAAGCGCATCCGTCCTGTGGGTTC
AGATAGTGAAATTGATGTCGATTTTCGAGTGATCAGCGCCAGTCATCAGGACTTAGAAAGTTTGGTTCAGCAAGGACGTT
TCCGTCAGGATTTATTCTTCCGTATTCACGTGATGGATTTGGTCTTGCCTGCCTTGCGTGAACGTGGACAAGATATTCTG
TTATTGGCAGACCACTTCATTCAAAAAGTTGCACAAGAATGGGACATTCCTGCCAAACAACTGACACCTCGTGCCCAGCA
ATTTTTATTAGAACAGTACTATCCAGGTAATGTGCGTGAGTTACGCAATATTATTGAACGTGCCATTACCCTGAGTGATG
ATGATGTTATTGATCTCAAACACTTACAAACCGCACCCTTGCGCCAATTCAGTATGAGCAATACAGCAACCACTGAACCA
CAACCTACAGCAGAAACACCACAGCAGATCGTGACAGATGTATTGCTGACAGGACGCAAACTGCCTAAAGAAGGTTTAGA
AGCCTACTTGGAAAAAGTAGAAAAAGACATTTTACTGAATGCGCTGCACCTGACCCACTGGAACCGTACGTTGGCAGCAA
AAAAATTGGGCATGTCTTTCCGTTCTTTGCGCTATCGTCTGAAAAAGTTTGGATTAGATACTGAAGATGAGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (430-470)

• Sigma-54 interaction domain (Sigma54_activat) (141-307)

• Response regulator receiver domain (Response_reg) (8-117)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	76.827	100	0.771
pilR	Pseudomonas aeruginosa PAK	49.571	97.694	0.484