Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACGHAD_RS01615 Genome accession   NZ_AP031500
Coordinates   384667..385062 (+) Length   131 a.a.
NCBI ID   WP_339617064.1    Uniprot ID   -
Organism   Gilvimarinus japonicus strain 12-2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 379667..390062
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACGHAD_RS01590 (R50076_03250) pilU 380167..381312 (+) 1146 WP_339617058.1 PilT/PilU family type 4a pilus ATPase Machinery gene
  ACGHAD_RS01595 (R50076_03260) ruvX 381382..381828 (-) 447 WP_382416749.1 Holliday junction resolvase RuvX -
  ACGHAD_RS01600 (R50076_03270) - 381821..382417 (-) 597 WP_382416751.1 YqgE/AlgH family protein -
  ACGHAD_RS01605 (R50076_03280) - 382479..383384 (-) 906 WP_382416752.1 energy transducer TonB -
  ACGHAD_RS01610 (R50076_03290) gshB 383387..384349 (-) 963 WP_339617062.1 glutathione synthase -
  ACGHAD_RS01615 (R50076_03300) pilG 384667..385062 (+) 396 WP_339617064.1 twitching motility response regulator PilG Regulator
  ACGHAD_RS01620 (R50076_03310) pilH 385121..385483 (+) 363 WP_339617065.1 twitching motility response regulator PilH -
  ACGHAD_RS01625 (R50076_03320) - 385567..386112 (+) 546 WP_339617066.1 chemotaxis protein CheW -
  ACGHAD_RS01630 (R50076_03330) - 386278..388509 (+) 2232 WP_339617067.1 methyl-accepting chemotaxis protein -
  ACGHAD_RS01635 (R50076_03340) - 388546..389409 (+) 864 WP_339617068.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14357.65 Da        Isoelectric Point: 6.9534

>NTDB_id=109947 ACGHAD_RS01615 WP_339617064.1 384667..385062(+) (pilG) [Gilvimarinus japonicus strain 12-2]
MDVSLESLKVMVIDDSKTIRRTAETLLKKAGCTVITATDGFDALAKIADSRPDIIFVDIMMPRLDGYQTCALIKNNTEFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKSELLGAIEEHVKQAQAS

Nucleotide


Download         Length: 396 bp        

>NTDB_id=109947 ACGHAD_RS01615 WP_339617064.1 384667..385062(+) (pilG) [Gilvimarinus japonicus strain 12-2]
ATGGACGTGAGTTTAGAAAGTCTGAAAGTAATGGTGATCGACGACAGTAAAACGATTCGTCGCACCGCAGAGACGTTACT
TAAAAAAGCCGGTTGTACTGTGATAACAGCAACGGATGGTTTTGACGCGCTCGCAAAAATCGCCGATTCACGGCCAGATA
TCATTTTTGTCGATATTATGATGCCGCGCCTCGATGGCTATCAGACCTGTGCGTTGATCAAGAATAATACCGAGTTCAAA
TCCACCCCCGTCATTATGTTGTCCAGTAAAGATGGATTGTTCGATAAGGCCAAGGGCCGAATCGTCGGGTCGGATCAGTA
TTTGACAAAGCCGTTTAGCAAAAGTGAGTTGCTTGGGGCGATAGAAGAGCACGTAAAACAGGCGCAGGCGTCGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

95.42

0.718
  vicR Streptococcus mutans UA159

40.496

92.366

0.374

Multiple sequence alignment