Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACM660_RS15900 Genome accession   NZ_CP181170
Coordinates   3374304..3374687 (-) Length   127 a.a.
NCBI ID   WP_004802929.1    Uniprot ID   -
Organism   Acinetobacter sp. SEK541     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3369304..3379687
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACM660_RS15885 (ACM660_15885) - 3371213..3373297 (-) 2085 WP_005206063.1 methyl-accepting chemotaxis protein -
  ACM660_RS15890 (ACM660_15890) - 3373344..3373880 (-) 537 WP_005206065.1 chemotaxis protein CheW -
  ACM660_RS15895 (ACM660_15895) - 3373921..3374283 (-) 363 WP_004652355.1 response regulator -
  ACM660_RS15900 (ACM660_15900) pilG 3374304..3374687 (-) 384 WP_004802929.1 twitching motility response regulator PilG Regulator
  ACM660_RS15905 (ACM660_15905) - 3374967..3375620 (+) 654 WP_005206068.1 hypothetical protein -
  ACM660_RS15910 (ACM660_15910) - 3375817..3377532 (+) 1716 WP_005206069.1 proline--tRNA ligase -
  ACM660_RS15915 (ACM660_15915) - 3377589..3377924 (-) 336 WP_005192866.1 YegP family protein -
  ACM660_RS15920 (ACM660_15920) - 3378072..3378416 (-) 345 WP_004802922.1 zinc ribbon domain-containing protein YjdM -
  ACM660_RS15925 (ACM660_15925) - 3378468..3378824 (-) 357 WP_005206071.1 DUF488 domain-containing protein -
  ACM660_RS15930 (ACM660_15930) - 3378849..3379211 (-) 363 WP_005206072.1 DUF2004 domain-containing protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14212.33 Da        Isoelectric Point: 4.7172

>NTDB_id=1099390 ACM660_RS15900 WP_004802929.1 3374304..3374687(-) (pilG) [Acinetobacter sp. SEK541]
MDDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSLNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=1099390 ACM660_RS15900 WP_004802929.1 3374304..3374687(-) (pilG) [Acinetobacter sp. SEK541]
ATGGACGATAAATTTCAAAATTTAAAGGTGATGGTAATTGACGATTCAAAAACGATTCGCCGTACAGCTGAGACCTTATT
ACAACGTGAAGGTTGTGAAGTGATCACTGCGGTTGATGGCTTTGAAGCATTGTCAAAAATTGCAGAAGCCAATCCAGATA
TCGTTTTTGTAGACATTATGATGCCTCGTTTAGACGGTTATCAAACCTGTGCATTAATCAAAAACTCTCTAAATTATCAA
AATATTCCAGTAATTATGTTGTCAAGCAAAGACGGTTTGTTTGATCAAGCGAAAGGGCGTGTTGTGGGGTCGGATGAATA
TTTAACCAAGCCATTCAGTAAAGATGAATTGTTAAATGCGATTCGCAACCACGTTAGCGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

96.85

100

0.969
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.228

89.764

0.37

Multiple sequence alignment