Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   ACM6AW_RS07740 Genome accession   NZ_CP181145
Coordinates   1617621..1618307 (-) Length   228 a.a.
NCBI ID   WP_001802022.1    Uniprot ID   A0A7U7EYP5
Organism   Staphylococcus aureus strain AG21-0629     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1612621..1623307
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACM6AW_RS07720 (ACM6AW_07720) rpsT 1613544..1613795 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  ACM6AW_RS07725 (ACM6AW_07725) holA 1613840..1614814 (-) 975 WP_001282563.1 DNA polymerase III subunit delta -
  ACM6AW_RS07730 (ACM6AW_07730) comEC 1614871..1617063 (-) 2193 WP_031763474.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  ACM6AW_RS07735 (ACM6AW_07735) - 1617068..1617529 (-) 462 WP_000439693.1 ComE operon protein 2 -
  ACM6AW_RS07740 (ACM6AW_07740) comEA 1617621..1618307 (-) 687 WP_001802022.1 ComEA family DNA-binding protein Machinery gene
  ACM6AW_RS07745 (ACM6AW_07745) - 1618347..1619063 (-) 717 WP_000084830.1 class I SAM-dependent DNA methyltransferase -
  ACM6AW_RS07750 (ACM6AW_07750) rsfS 1619066..1619419 (-) 354 WP_001088020.1 ribosome silencing factor -
  ACM6AW_RS07755 (ACM6AW_07755) yqeK 1619420..1620004 (-) 585 WP_001019324.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  ACM6AW_RS07760 (ACM6AW_07760) nadD 1619994..1620563 (-) 570 WP_000725167.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  ACM6AW_RS07765 (ACM6AW_07765) yhbY 1620566..1620856 (-) 291 WP_000955235.1 ribosome assembly RNA-binding protein YhbY -
  ACM6AW_RS07770 (ACM6AW_07770) aroE 1620860..1621666 (-) 807 WP_000666757.1 shikimate dehydrogenase -
  ACM6AW_RS07775 (ACM6AW_07775) yqeH 1621680..1622780 (-) 1101 WP_416152723.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25900.65 Da        Isoelectric Point: 9.6751

>NTDB_id=1099048 ACM6AW_RS07740 WP_001802022.1 1617621..1618307(-) (comEA) [Staphylococcus aureus strain AG21-0629]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENNSLSKLEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSRINLSEKLTDQKMIFIPHKGQKNVEPQIEVNSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTI

Nucleotide


Download         Length: 687 bp        

>NTDB_id=1099048 ACM6AW_RS07740 WP_001802022.1 1617621..1618307(-) (comEA) [Staphylococcus aureus strain AG21-0629]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAGTGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAATAGTTTGTCCAAATTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAAGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGATGATGCAGATGTAAGTCGAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATACCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGAAGTAAACAGTGTGCACGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACCGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGATATAA

Domains

Predicted by InterProScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus N315

100

100

1
  comEA Staphylococcus aureus MW2

97.368

100

0.974

Multiple sequence alignment