Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEC   Type   Machinery gene
Locus tag   ACM6AW_RS07730 Genome accession   NZ_CP181145
Coordinates   1614871..1617063 (-) Length   730 a.a.
NCBI ID   WP_031763474.1    Uniprot ID   -
Organism   Staphylococcus aureus strain AG21-0629     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1609871..1622063
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACM6AW_RS07715 (ACM6AW_07715) lepA 1611375..1613198 (-) 1824 WP_000368338.1 translation elongation factor 4 -
  ACM6AW_RS07720 (ACM6AW_07720) rpsT 1613544..1613795 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  ACM6AW_RS07725 (ACM6AW_07725) holA 1613840..1614814 (-) 975 WP_001282563.1 DNA polymerase III subunit delta -
  ACM6AW_RS07730 (ACM6AW_07730) comEC 1614871..1617063 (-) 2193 WP_031763474.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  ACM6AW_RS07735 (ACM6AW_07735) - 1617068..1617529 (-) 462 WP_000439693.1 ComE operon protein 2 -
  ACM6AW_RS07740 (ACM6AW_07740) comEA 1617621..1618307 (-) 687 WP_001802022.1 ComEA family DNA-binding protein Machinery gene
  ACM6AW_RS07745 (ACM6AW_07745) - 1618347..1619063 (-) 717 WP_000084830.1 class I SAM-dependent DNA methyltransferase -
  ACM6AW_RS07750 (ACM6AW_07750) rsfS 1619066..1619419 (-) 354 WP_001088020.1 ribosome silencing factor -
  ACM6AW_RS07755 (ACM6AW_07755) yqeK 1619420..1620004 (-) 585 WP_001019324.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  ACM6AW_RS07760 (ACM6AW_07760) nadD 1619994..1620563 (-) 570 WP_000725167.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  ACM6AW_RS07765 (ACM6AW_07765) yhbY 1620566..1620856 (-) 291 WP_000955235.1 ribosome assembly RNA-binding protein YhbY -
  ACM6AW_RS07770 (ACM6AW_07770) aroE 1620860..1621666 (-) 807 WP_000666757.1 shikimate dehydrogenase -

Sequence

Protein


Download         Length: 730 a.a.        Molecular weight: 84624.55 Da        Isoelectric Point: 10.0028

>NTDB_id=1099046 ACM6AW_RS07730 WP_031763474.1 1614871..1617063(-) (comEC) [Staphylococcus aureus strain AG21-0629]
MLYVALSMIVGVLWNSSKVLSTFLFILLLYITYRKNKIVYAPISLFLIIFSSWYLHYSQQAIFNYINYIERNSQFNERAQ
VIQIQRQGSDTYKGRLSLKNEIYPFFLTDKKNFDLKKIESRNCIVKGQFKVNENKFVTLKLQSIVVQSCLESNRSNLIEK
HKQFIMNRIYDSGIKFPDRIMALITGDVKEINEQFKERVKEIGIYHLLAVSGSHIAAIVFLIYQPLKRLNLPLFVIKGIT
IIVLTLYAQYTNYAPSAVRAIIMTTLVLLITKQIKIKGIQLLAFAFIIMFILNPLVVYDIGFQFSFIISFFIMLLFPFLQ
QLSKLQSLFIITFIAQLASFIVAIPNFHQLQWVGFLSNLIFVPYYSIILFPLSILFFITSHFIVGLTPLNYLVDLSFNFH
DWLLDLFTRIKQSHFSVPKFNDWIFIISVYYIFWLLAKRKYILVTFWTIIILTLLITFPTNSHHKITMLNVGQGDSILYE
GGKNQNVLIDTGGKVIDDTKQPSYSISKYHILPTLNERGINELEYLILTHPHNDHIGEVEYIISHIKIKHIVIYNKGYSS
NTLMLLSKLSHKYNIKLMDVRQVSSFKLGDSSFLFFDSFIPNSRDKNEYSIITMITYQNKKVLLMGDASKNNESLLLKKY
NLPEIDILKVGHHGSKTSSSKEFIEMIKPKISLISSGKNNMYHLPNIEVVKRLQRIRSRIYNSQQNGQVTIDLDDNLKVD
SNSYGNASGL

Nucleotide


Download         Length: 2193 bp        

>NTDB_id=1099046 ACM6AW_RS07730 WP_031763474.1 1614871..1617063(-) (comEC) [Staphylococcus aureus strain AG21-0629]
TTGCTGTATGTCGCGTTATCAATGATTGTAGGAGTGCTTTGGAATTCTAGCAAAGTGCTCTCTACATTTCTTTTCATTTT
ACTTTTGTATATTACTTATCGTAAAAATAAAATCGTTTATGCCCCTATTTCTCTCTTTTTAATCATTTTCTCCTCATGGT
ATTTACATTATTCACAACAAGCAATATTTAATTATATCAATTATATTGAACGTAATTCTCAGTTTAATGAGCGTGCTCAA
GTAATCCAAATTCAACGTCAAGGTAGTGACACATATAAAGGTAGGTTGAGTTTAAAAAATGAAATATATCCTTTCTTTTT
AACAGATAAAAAGAATTTTGATTTAAAGAAAATTGAAAGTCGTAATTGTATTGTTAAAGGACAATTCAAAGTTAATGAAA
ATAAGTTTGTAACTCTTAAATTACAAAGTATAGTTGTACAAAGCTGCCTAGAATCGAACCGGTCTAATTTAATTGAGAAA
CATAAACAGTTTATAATGAATCGAATTTATGATTCGGGTATTAAGTTTCCGGATCGTATTATGGCATTGATTACTGGTGA
CGTAAAAGAAATTAATGAGCAATTTAAGGAACGTGTTAAAGAGATAGGTATATATCATTTGCTGGCAGTTAGTGGCTCGC
ATATAGCTGCAATTGTATTCTTAATTTACCAACCTTTAAAACGATTAAATTTACCTTTATTTGTCATTAAAGGAATTACA
ATCATTGTATTAACTTTATATGCTCAATACACAAATTATGCACCTAGTGCTGTAAGAGCTATAATAATGACAACTCTTGT
ACTGCTTATTACTAAGCAAATTAAAATAAAGGGTATTCAGCTATTAGCATTTGCATTTATAATTATGTTTATTTTAAACC
CACTAGTTGTTTATGATATTGGATTTCAATTTTCATTCATCATTTCATTTTTTATTATGCTACTTTTTCCTTTTTTACAG
CAATTGTCAAAGTTACAATCATTATTCATAATTACGTTTATTGCACAATTAGCTTCATTTATCGTTGCCATTCCAAACTT
TCATCAACTTCAATGGGTGGGATTTTTATCTAATTTGATTTTTGTACCGTACTATTCGATTATATTGTTTCCGCTATCTA
TTTTATTCTTTATTACAAGTCATTTTATTGTGGGATTAACGCCGCTAAATTACTTGGTTGACCTAAGTTTTAATTTTCAT
GACTGGTTACTAGACCTATTCACAAGAATTAAGCAATCACATTTTTCTGTTCCCAAATTTAATGATTGGATATTTATAAT
TTCTGTTTATTACATATTTTGGTTATTGGCTAAACGTAAATATATATTGGTTACGTTTTGGACTATAATTATTCTGACAT
TATTAATAACGTTTCCAACAAATTCACATCACAAAATTACAATGTTAAATGTGGGGCAGGGAGACAGTATTTTATATGAA
GGCGGTAAGAACCAAAATGTCTTGATTGATACAGGTGGGAAAGTGATTGATGATACTAAACAACCTAGTTATTCAATTTC
TAAATATCATATTTTACCAACGCTAAATGAAAGAGGGATAAATGAATTAGAGTATCTAATTTTAACACATCCACACAATG
ACCATATTGGTGAAGTGGAATATATTATTAGTCATATTAAAATTAAACATATAGTGATATACAATAAGGGATATAGTAGT
AATACATTGATGTTATTATCGAAATTAAGCCATAAGTACAACATTAAACTTATGGATGTAAGACAAGTTAGTAGTTTTAA
ACTTGGAGATAGTAGTTTTCTATTTTTTGATAGTTTTATTCCAAATAGCCGAGATAAAAATGAGTATTCGATTATTACTA
TGATTACATATCAAAATAAAAAAGTTTTATTAATGGGCGATGCTAGTAAAAATAATGAATCTTTACTACTAAAAAAATAT
AACTTGCCGGAGATTGATATTTTAAAAGTAGGACATCATGGGAGCAAGACAAGTAGTTCTAAAGAATTTATAGAGATGAT
TAAGCCTAAAATAAGTTTGATTTCTTCTGGGAAGAACAATATGTATCATCTTCCTAATATAGAAGTTGTTAAACGATTGC
AAAGGATTCGCAGTCGCATTTACAATAGTCAACAAAACGGTCAAGTTACAATTGACTTAGATGATAATTTAAAAGTTGAT
TCAAACTCTTATGGAAATGCAAGTGGTTTATAG

Domains

Predicted by InterproScan.

Competence protein (Competence)

(183-438)

Metallo-beta-lactamase superfamily (Lactamase_B)

(471-676)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEC Staphylococcus aureus N315

99.591

100

1
  comEC Staphylococcus aureus MW2

98.363

100

0.988

Multiple sequence alignment