Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACGHM3_RS02325 Genome accession   NZ_AP031496
Coordinates   505199..505594 (-) Length   131 a.a.
NCBI ID   WP_345419428.1    Uniprot ID   A0AAV3U068
Organism   Halioxenophilus aromaticivorans strain KU68F     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 500199..510594
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACGHM3_RS02305 (R50071_04590) - 500461..501282 (-) 822 WP_345419416.1 CheR family methyltransferase -
  ACGHM3_RS02310 (R50071_04600) - 501325..503571 (-) 2247 WP_345419419.1 methyl-accepting chemotaxis protein -
  ACGHM3_RS02315 (R50071_04610) - 503823..504374 (-) 552 WP_345419422.1 chemotaxis protein CheW -
  ACGHM3_RS02320 (R50071_04620) pilH 504430..504792 (-) 363 WP_345419425.1 twitching motility response regulator PilH -
  ACGHM3_RS02325 (R50071_04630) pilG 505199..505594 (-) 396 WP_345419428.1 twitching motility response regulator PilG Regulator
  ACGHM3_RS02330 (R50071_04640) gshB 505880..506827 (+) 948 WP_345419432.1 glutathione synthase -
  ACGHM3_RS02335 (R50071_04650) - 506985..507857 (+) 873 WP_345419435.1 energy transducer TonB -
  ACGHM3_RS02340 (R50071_04660) - 508000..508584 (+) 585 WP_345419438.1 YqgE/AlgH family protein -
  ACGHM3_RS02345 (R50071_04670) ruvX 508707..509156 (+) 450 WP_345419442.1 Holliday junction resolvase RuvX -
  ACGHM3_RS02350 (R50071_04680) pilU 509153..510295 (-) 1143 WP_345419445.1 PilT/PilU family type 4a pilus ATPase Machinery gene

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14244.50 Da        Isoelectric Point: 6.9527

>NTDB_id=109868 ACGHM3_RS02325 WP_345419428.1 505199..505594(-) (pilG) [Halioxenophilus aromaticivorans strain KU68F]
MEVKLESLKVMVIDDSKTIRRTAETLLQKAGCTVVTATDGFDALAKIADSRPDIIFVDIMMPRLDGYQTCALIKNNSEFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKSELLGAIETHVGSAQAS

Nucleotide


Download         Length: 396 bp        

>NTDB_id=109868 ACGHM3_RS02325 WP_345419428.1 505199..505594(-) (pilG) [Halioxenophilus aromaticivorans strain KU68F]
ATGGAAGTAAAATTGGAAAGTTTAAAAGTCATGGTGATTGACGACAGTAAAACCATTCGTCGCACCGCAGAAACTTTATT
GCAAAAAGCCGGCTGCACGGTTGTCACCGCCACCGACGGCTTCGACGCCCTGGCTAAAATCGCCGACAGTCGCCCGGACA
TCATCTTCGTTGACATCATGATGCCTCGCCTAGACGGCTACCAAACCTGCGCCCTGATCAAAAACAACAGCGAATTCAAA
TCTACCCCCGTCATTATGCTGTCCAGCAAAGACGGGCTATTCGATAAAGCCAAAGGCCGCATCGTTGGCTCAGATCAATA
CCTAACCAAGCCTTTTAGCAAAAGCGAGTTACTCGGTGCCATTGAGACCCACGTTGGTTCCGCTCAAGCGTCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.591

96.947

0.733
  vicR Streptococcus mutans UA159

41.88

89.313

0.374

Multiple sequence alignment