Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   ACM2W4_RS10505 Genome accession   NZ_CP181086
Coordinates   2242688..2243956 (-) Length   422 a.a.
NCBI ID   WP_416135681.1    Uniprot ID   -
Organism   Enterococcus casseliflavus strain B6     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2237688..2248956
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACM2W4_RS10500 (ACM2W4_10500) - 2240910..2242619 (-) 1710 WP_225001241.1 proline--tRNA ligase -
  ACM2W4_RS10505 (ACM2W4_10505) eeP 2242688..2243956 (-) 1269 WP_416135681.1 RIP metalloprotease RseP Regulator
  ACM2W4_RS10510 (ACM2W4_10510) - 2244106..2244912 (-) 807 WP_010749318.1 phosphatidate cytidylyltransferase -
  ACM2W4_RS10515 (ACM2W4_10515) - 2244909..2245709 (-) 801 WP_225001239.1 isoprenyl transferase -
  ACM2W4_RS10520 (ACM2W4_10520) frr 2245901..2246458 (-) 558 WP_416135682.1 ribosome recycling factor -
  ACM2W4_RS10525 (ACM2W4_10525) pyrH 2246460..2247182 (-) 723 WP_005229433.1 UMP kinase -
  ACM2W4_RS10530 (ACM2W4_10530) tsf 2247330..2248211 (-) 882 WP_005229432.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 45395.72 Da        Isoelectric Point: 4.4845

>NTDB_id=1098090 ACM2W4_RS10505 WP_416135681.1 2242688..2243956(-) (eeP) [Enterococcus casseliflavus strain B6]
MKTILVFIIIFSVVVVIHEFGHYFFAKRAGILVREFAIGMGPKLFAHQAKDGTTYTIRMLPLGGYVQMAGWGEDETELTP
GMPVSLVQDATGKVIKINTSKKIQLPQAIPMEVTDFDLEEKLTITGVINGNEQEAVMYAVDHDATIIHEDGVEVRIAPKD
VQFQSAKLWQRMLTNFAGPMNNFILSLVLFTGLVFAQGGVANQDATIVTGIEAGTPAAEAGLQNGDEILAVEGVDVSNWS
ELTTEIQKYPDTQIALAVKRGSETLDLTATPASQESGETTIGFLGITASLKTGIGDILLGGLQTTIDNSLVIFRAVGNLI
AQPDINKLGGPVAIFQLSSQAASQGVTTVIAMMAMISINLGIFNLLPIPGLDGGKLVLNILEGLRGKPISQEKEGIITLI
GFGFLMLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=1098090 ACM2W4_RS10505 WP_416135681.1 2242688..2243956(-) (eeP) [Enterococcus casseliflavus strain B6]
ATGAAAACGATACTTGTATTTATCATTATCTTTTCCGTAGTGGTAGTGATTCACGAGTTTGGACACTACTTCTTTGCAAA
ACGGGCAGGTATTTTAGTAAGAGAGTTTGCCATCGGTATGGGGCCTAAATTGTTCGCGCATCAAGCGAAAGATGGGACGA
CCTACACGATTCGGATGCTGCCATTAGGCGGGTATGTCCAAATGGCGGGCTGGGGTGAAGATGAAACAGAATTAACACCA
GGTATGCCAGTCTCCTTGGTTCAAGATGCAACTGGCAAAGTTATCAAAATCAATACGAGCAAAAAGATCCAATTGCCGCA
AGCGATCCCTATGGAAGTGACCGACTTTGACTTGGAGGAAAAGTTGACGATCACAGGGGTCATCAACGGCAATGAACAAG
AAGCGGTTATGTACGCTGTGGATCATGACGCAACGATCATTCATGAAGATGGCGTTGAAGTTCGGATCGCACCAAAAGAC
GTTCAATTTCAGTCCGCAAAGCTTTGGCAGCGAATGTTGACGAATTTTGCCGGACCGATGAACAACTTTATTTTATCCTT
GGTCTTATTCACTGGGTTGGTGTTTGCACAAGGTGGTGTTGCGAATCAAGATGCAACCATCGTGACAGGAATCGAAGCAG
GAACACCGGCAGCTGAAGCAGGGCTGCAAAATGGCGATGAAATCTTAGCTGTCGAAGGTGTCGATGTTTCTAACTGGTCA
GAATTAACGACTGAGATCCAAAAGTACCCAGATACTCAGATTGCTCTAGCAGTCAAACGAGGATCAGAAACACTTGATTT
GACGGCAACTCCTGCGAGTCAAGAATCAGGGGAGACCACGATCGGTTTCTTAGGGATCACCGCTTCCTTAAAAACTGGGA
TCGGAGATATCTTACTGGGTGGCTTGCAAACGACCATTGACAATTCACTGGTGATTTTTAGAGCAGTCGGCAACTTGATT
GCCCAACCAGATATCAATAAATTGGGTGGACCGGTAGCGATTTTCCAACTGTCTTCTCAAGCTGCATCGCAAGGGGTAAC
AACGGTGATCGCGATGATGGCGATGATTTCTATCAACTTGGGGATCTTTAATTTATTACCGATTCCTGGATTGGATGGCG
GTAAGCTGGTTTTAAATATTTTAGAAGGTTTGCGAGGCAAGCCAATCAGCCAAGAAAAAGAAGGCATCATTACCCTGATT
GGGTTTGGGTTTTTGATGCTGCTGATGGTTCTCGTTACCTGGAATGATATCCAACGTTTCTTCTTTTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(207-260)

Peptidase family M50 (Peptidase_M50)

(7-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

51.991

100

0.526
  eeP Streptococcus thermophilus LMG 18311

51.054

100

0.517

Multiple sequence alignment