Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   ABXG87_RS06800 Genome accession   NZ_AP031488
Coordinates   1467503..1468504 (-) Length   333 a.a.
NCBI ID   WP_014634136.1    Uniprot ID   A0A1V0H5P5
Organism   Streptococcus salivarius strain NBRC 13956     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1462503..1473504
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABXG87_RS06775 (Ssa13956_12760) - 1462914..1463099 (+) 186 WP_002886071.1 hypothetical protein -
  ABXG87_RS06780 (Ssa13956_12770) eno 1463252..1464556 (-) 1305 WP_002886048.1 surface-displayed alpha-enolase -
  ABXG87_RS06785 (Ssa13956_12780) - 1464762..1465217 (+) 456 WP_049546187.1 YueI family protein -
  ABXG87_RS06790 (Ssa13956_12790) - 1465248..1466363 (-) 1116 WP_353551311.1 glycerate kinase -
  ABXG87_RS06795 (Ssa13956_12800) - 1466376..1467443 (-) 1068 WP_353551312.1 MmcQ/YjbR family DNA-binding protein -
  ABXG87_RS06800 (Ssa13956_12810) ccpA 1467503..1468504 (-) 1002 WP_014634136.1 catabolite control protein A Regulator
  ABXG87_RS06805 (Ssa13956_12820) - 1468817..1469899 (+) 1083 WP_073950833.1 Xaa-Pro peptidase family protein -
  ABXG87_RS06810 (Ssa13956_12830) - 1469998..1470366 (-) 369 WP_002890446.1 S1 RNA-binding domain-containing protein -
  ABXG87_RS06815 (Ssa13956_12840) - 1470368..1471774 (-) 1407 WP_037599247.1 Cof-type HAD-IIB family hydrolase -
  ABXG87_RS06820 (Ssa13956_12850) smpB 1471921..1472385 (-) 465 WP_002885905.1 SsrA-binding protein SmpB -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36646.55 Da        Isoelectric Point: 5.4827

>NTDB_id=109804 ABXG87_RS06800 WP_014634136.1 1467503..1468504(-) (ccpA) [Streptococcus salivarius strain NBRC 13956]
MNTDETITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFA
TLARGIDDIATMYKYNIVLASSDENDDHEVTVINSLFAKQVDGIIFMGYHLTEKIRAEFSRTRTPIVLAGTVDLEHQLPS
VNIDYKAAVEDSVTQLAKNNEKVAFVSGPLIDDINGKLRLAGYKAGLEKNNLRYNEGLVFEAKYSYKDGFDLAQRVLNSG
ATAAYVGEDELAAGLLNGLFAAGKSVPEDFEIITSNDSPITSYTRPNLSSINHPLYDLGAVSMRMLTKIMNKEELEEKDV
ILNHGITLRQSTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=109804 ABXG87_RS06800 WP_014634136.1 1467503..1468504(-) (ccpA) [Streptococcus salivarius strain NBRC 13956]
ATGAATACTGATGAAACAATCACTATTTATGACGTTGCGCGTGAGGCAGGCGTTTCGATGGCGACTGTGTCTCGTGTGGT
AAATGGAAATAAAAATGTAAAAGAAAACACCCGAAAAAAAGTGCTCGAGGTCATTGATCGTTTGGATTATCGTCCAAATG
CGGTTGCGCGTGGCTTGGCGAGTAAGAAAACCACTACTGTAGGAGTTGTCATCCCAAATATTGCAAATAGCTATTTTGCT
ACTTTAGCAAGGGGGATTGATGATATTGCAACGATGTACAAGTACAATATTGTACTTGCTTCTAGTGATGAAAATGACGA
TCACGAAGTTACTGTGATTAACTCTCTATTTGCCAAACAAGTAGATGGTATCATCTTCATGGGTTACCACTTGACGGAAA
AAATTCGTGCAGAATTTTCTCGTACCCGTACTCCGATTGTCCTAGCAGGAACAGTGGACCTCGAACACCAATTACCGAGC
GTTAACATCGACTATAAAGCTGCCGTTGAGGATTCTGTAACGCAACTTGCCAAGAATAATGAAAAGGTTGCCTTTGTATC
AGGACCACTAATTGACGATATTAATGGCAAGCTCCGTCTAGCTGGTTATAAGGCCGGACTTGAAAAGAATAATTTGCGCT
ACAATGAAGGACTTGTCTTTGAAGCTAAATATAGCTATAAAGACGGCTTTGATTTAGCACAACGTGTCTTGAACTCTGGT
GCCACTGCTGCCTATGTTGGGGAAGATGAATTGGCTGCAGGTCTCTTGAATGGCCTCTTTGCTGCAGGTAAATCCGTTCC
AGAAGACTTCGAAATCATCACAAGCAATGACTCACCAATTACAAGCTATACACGTCCAAACCTTTCTAGTATTAATCATC
CTCTCTATGATTTAGGGGCAGTTAGCATGCGTATGTTGACTAAAATCATGAATAAGGAAGAGCTTGAAGAAAAAGATGTT
ATTCTTAATCACGGTATTACCTTACGTCAGTCAACAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1V0H5P5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

77.477

100

0.775

  ccpA Streptococcus pneumoniae D39

75.976

100

0.76

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.891

99.399

0.556


Multiple sequence alignment