Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ABXG87_RS05380 Genome accession   NZ_AP031488
Coordinates   1181441..1182253 (-) Length   270 a.a.
NCBI ID   WP_013990680.1    Uniprot ID   A0AAX1YAX4
Organism   Streptococcus salivarius strain NBRC 13956     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1176441..1187253
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABXG87_RS05350 (Ssa13956_10000) - 1176640..1177404 (-) 765 Protein_1000 nucleoside phosphorylase -
  ABXG87_RS05355 (Ssa13956_10010) - 1177409..1178275 (-) 867 WP_004182606.1 GNAT family N-acetyltransferase -
  ABXG87_RS05360 (Ssa13956_10020) yidA 1178454..1179260 (+) 807 WP_004182607.1 sugar-phosphatase -
  ABXG87_RS05365 (Ssa13956_10030) - 1179260..1180474 (+) 1215 WP_004182608.1 aminoacyltransferase -
  ABXG87_RS05370 - 1180576..1180852 (-) 277 Protein_1004 ISL3 family transposase -
  ABXG87_RS05375 (Ssa13956_10040) - 1181023..1181382 (-) 360 WP_045769141.1 YbaN family protein -
  ABXG87_RS05380 (Ssa13956_10050) vicX 1181441..1182253 (-) 813 WP_013990680.1 MBL fold metallo-hydrolase Regulator
  ABXG87_RS05385 (Ssa13956_10060) vicK 1182259..1183599 (-) 1341 WP_002885062.1 cell wall metabolism sensor histidine kinase VicK Regulator
  ABXG87_RS05390 (Ssa13956_10070) vicR 1183592..1184299 (-) 708 WP_002884978.1 response regulator YycF Regulator
  ABXG87_RS05395 (Ssa13956_10080) - 1184584..1185351 (+) 768 WP_038675884.1 amino acid ABC transporter ATP-binding protein -
  ABXG87_RS05400 (Ssa13956_10090) - 1185361..1186194 (+) 834 WP_013990682.1 transporter substrate-binding domain-containing protein -
  ABXG87_RS05405 (Ssa13956_10100) - 1186212..1186910 (+) 699 WP_002886251.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30108.96 Da        Isoelectric Point: 5.3499

>NTDB_id=109797 ABXG87_RS05380 WP_013990680.1 1181441..1182253(-) (vicX) [Streptococcus salivarius strain NBRC 13956]
MTSDLGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVGVLARKYGM
DIYANEKTWQIMDSKNMLGKIDNSQKHVFSRDKLLTFGDIDIESFGVSHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMA
GIIENADGYLIESNHDVEILRAGSYPWSTKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAHMTME
NQLARADFGVGTDFKVYDTSPDTATPLTDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=109797 ABXG87_RS05380 WP_013990680.1 1181441..1182253(-) (vicX) [Streptococcus salivarius strain NBRC 13956]
ATGACCTCAGATTTAGGGTTTAAATATAGTATTTTGGCTTCAGGGTCAACTGGTAATTCCTTTTACTTGGAAACTCCAGA
GAAGAAGATTCTTGTAGATGCTGGTTTGTCTGGTAAGAAAATCACAAGTTTGCTAGCTGAGATTGATCGTGATCCGAGTG
ATTTGGATGCAATCTTAGTAACGCATGAACACAAGGATCACATCCATGGTGTAGGCGTTTTAGCTCGTAAATATGGCATG
GATATCTACGCCAACGAGAAAACCTGGCAGATTATGGATAGTAAAAATATGCTTGGCAAGATTGATAATAGCCAGAAACA
TGTTTTTTCTCGTGATAAGCTTCTGACCTTTGGAGACATTGATATTGAGTCTTTTGGAGTTAGTCACGATGCTATTGATC
CACAGTTCTATCGCTTTATGAAAGATGGAAAGAGTTTCGTCATGTTGACGGATACGGGTTATGTTTCTGATCGTATGGCA
GGTATTATTGAGAATGCCGATGGCTATCTGATTGAGTCCAATCATGATGTTGAAATCCTTAGAGCAGGTTCATATCCTTG
GTCGACCAAGCAACGTATCCTCTCTGATCAAGGTCACTTGTGTAATGAAGATGGAGCGGATGCTATGATTCGTACCATTG
GTAATAAAACTAAAAAAATCTACTTGGGTCACCTTTCCAAAGAAAATAATATCAAGGAGTTGGCCCACATGACGATGGAA
AATCAGTTGGCACGTGCTGACTTTGGTGTTGGAACTGACTTTAAAGTTTATGATACCTCACCAGATACAGCGACTCCACT
GACAGACATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-214)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.239

99.259

0.767

Multiple sequence alignment