Detailed information NTG1097460

Bioinformatically predicted

Overview

• Name: comA/comEC
• Type: Machinery gene
• Locus tag: ACM0O0_RS04605
• Genome accession: NZ_CP180689
• Coordinates: 975946..978378 (+)
• Length: 810 a.a.
• NCBI ID: WP_416041178.1
• Uniprot ID: -
• Organism: Acinetobacter lactucae isolate nanjing
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	975175..983062	975946..978378	within	0

Gene organization within MGE regions

Location: 975175..983062

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACM0O0_RS04600	lolD	975175..975861 (+)	687	WP_057106242.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
ACM0O0_RS04605	comA/comEC	975946..978378 (+)	2433	WP_416041178.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ACM0O0_RS04610	-	978331..979314 (-)	984	WP_016146164.1	lysophospholipid acyltransferase family protein	-
ACM0O0_RS04615	sppA	979448..980464 (+)	1017	WP_016146163.1	signal peptide peptidase SppA	-
ACM0O0_RS04620	-	980488..981297 (+)	810	WP_061875432.1	alpha/beta fold hydrolase	-
ACM0O0_RS04625	purN	981366..981995 (-)	630	WP_416041179.1	phosphoribosylglycinamide formyltransferase	-
ACM0O0_RS04630	purM	981992..983062 (-)	1071	WP_062849823.1	phosphoribosylformylglycinamidine cyclo-ligase	-

Sequence

Protein

• Length: 810 a.a.
• Molecular weight: 92559.92 Da
• Isoelectric Point: 8.9178

>NTDB_id=1097460 ACM0O0_RS04605 WP_416041178.1 975946..978378(+) (comA/comEC) [Acinetobacter lactucae isolate nanjing]
MLKLILMGWIGGIAFMGIDIPLIMQYGWVGNVLLVMAFIFYIFKRNIFLSRPILKAIYCLVCAISLFTIGHQYAQNALNE
RLQLRQMQPKSLDIVVYVDHISEEKEDKTQQPVQVLGQSLHPVNWLLYLKSQEVNSAIDEPKLQLGHYYRISGKTRPAHS
YAVAGAFDQEQWFIQRDIMSGFSVQHIESLSSNEMYRLGYQHHLKEQQKFFNRQKLNIEKLRLKFRLMLKQSPLENKGLL
LALLTGDESLLNDEIKNQFKELGISHLLAISGPHVLIFAIMLSWGLHQLVRRYYPQLYLHQPKQIWAMIPLCFGVLIYTA
FVGFEIPALRTLLSVVLFASLLLIKLPVRPFSLLVYSASLLLFFDPFSVLSAGFWLSYGSCFILLRIYQTIEQVPNLVST
SLLSRIILFSKILIESQGKIFIALCPLMLIFFQQISWVAPFTNIIAVPLLGGVIVPLNIFAACVWLIFNSFGNLLFQIND
VLISIVLTCFDLLEKLSLPLQGFSLTPLDLVCLSFVIIILFLPRGVLPKSWGLICCLPLVIPNKSSQQIQINIIDVGQGQ
AIFLQHPQQTWLIDTGGSYDEKAFSIGQNVVIPYLRQKGIKQLDHVILSHLDQDHSGAFPSIAQAFPIKQVISNELWTEQ
IKEPFTYCHQGQKWQYPQLDIEILWPKGKDLNLVSSNQNQYSCVVYIHLKQVTGYQNYLIMGDAGWEAEYQLIKEYPELK
VDVLVLGHHGSKHSSAYDFLATLKPKLVIASAGFNNRYGHPSKEVLARVQALHIPFKSTVGQGTLNFVSRNHEMVLYTRR
FERTWLHRNL

Nucleotide

• Length: 2433 bp

>NTDB_id=1097460 ACM0O0_RS04605 WP_416041178.1 975946..978378(+) (comA/comEC) [Acinetobacter lactucae isolate nanjing]
ATGTTAAAACTTATTTTAATGGGGTGGATTGGGGGTATTGCATTTATGGGGATAGATATCCCTCTCATAATGCAATATGG
GTGGGTAGGTAATGTCTTGCTCGTTATGGCCTTTATTTTTTATATTTTTAAGAGAAATATATTCTTAAGTCGACCCATAT
TAAAAGCCATTTACTGTCTAGTCTGCGCTATTAGTCTTTTTACTATAGGACATCAATATGCTCAGAATGCCTTAAATGAA
AGATTACAACTGCGACAAATGCAGCCTAAATCTTTAGATATAGTTGTGTATGTAGACCACATAAGTGAAGAAAAAGAAGA
TAAAACACAGCAACCCGTTCAGGTATTAGGGCAGTCCTTACATCCCGTTAACTGGCTATTATATTTAAAAAGCCAAGAAG
TAAACTCAGCGATAGATGAACCAAAATTACAATTAGGTCATTACTATCGAATTTCGGGTAAAACCAGACCAGCTCATAGC
TATGCAGTGGCAGGAGCTTTTGATCAAGAACAATGGTTTATTCAGCGAGACATAATGTCTGGTTTTAGTGTTCAGCATAT
TGAGTCTTTAAGCTCTAATGAAATGTATCGGTTGGGTTATCAACATCATTTAAAAGAGCAACAAAAGTTTTTTAACAGAC
AAAAATTAAATATAGAAAAATTGCGTCTAAAATTTAGATTAATGCTGAAACAATCTCCTTTAGAGAATAAGGGACTTTTA
TTAGCTTTATTAACAGGGGATGAAAGTCTCTTAAATGATGAGATTAAAAATCAATTTAAGGAATTAGGAATCTCTCATTT
ATTGGCAATTTCAGGGCCTCATGTGCTCATTTTTGCCATCATGTTGTCTTGGGGATTACATCAATTAGTACGACGTTATT
ATCCGCAGCTTTATTTGCATCAACCTAAACAAATTTGGGCCATGATTCCATTATGTTTCGGTGTTTTGATTTATACCGCA
TTTGTTGGTTTTGAAATTCCCGCCTTAAGAACTTTACTTTCAGTAGTTTTATTTGCTTCTTTATTATTGATCAAACTGCC
TGTTAGGCCATTTTCACTGTTAGTTTACAGTGCAAGTCTACTTTTATTTTTCGATCCTTTCAGTGTTTTATCTGCAGGCT
TTTGGCTCTCTTATGGTTCCTGCTTTATTTTATTACGGATTTATCAAACTATTGAACAGGTTCCAAATCTTGTTTCAACG
AGTCTGTTATCTAGAATCATTCTTTTCAGTAAAATTTTAATTGAATCTCAAGGCAAAATATTTATTGCCTTATGTCCCTT
AATGTTGATTTTCTTTCAACAGATTTCATGGGTTGCTCCTTTTACAAATATTATTGCTGTTCCTTTACTCGGAGGAGTGA
TTGTTCCTTTAAACATTTTTGCAGCTTGTGTATGGCTTATTTTTAACTCATTCGGAAATTTACTTTTTCAAATTAATGAT
GTCCTGATTAGTATAGTACTGACATGTTTTGATCTTTTAGAAAAGCTATCATTACCCTTACAAGGCTTTAGCCTGACACC
ACTTGATTTAGTTTGCCTTAGCTTCGTTATTATTATCTTATTTTTACCGCGTGGGGTCTTACCAAAATCTTGGGGGCTCA
TATGCTGTTTACCCTTAGTTATTCCAAATAAGTCGTCCCAGCAAATTCAAATCAATATTATAGATGTAGGACAGGGACAA
GCTATTTTCCTGCAGCACCCGCAGCAGACATGGCTCATCGATACGGGTGGGTCTTATGATGAAAAGGCTTTTAGTATTGG
TCAAAATGTGGTGATCCCATATTTACGTCAAAAGGGAATTAAACAATTAGATCACGTCATACTATCTCATCTTGACCAAG
ACCATAGCGGAGCATTTCCTTCTATCGCACAGGCTTTTCCTATTAAACAAGTCATATCAAATGAATTATGGACAGAACAA
ATTAAAGAACCATTTACTTATTGTCATCAAGGGCAAAAATGGCAATATCCACAATTAGATATTGAAATCCTTTGGCCTAA
AGGAAAGGATTTAAATTTAGTTTCTTCAAATCAAAATCAATATTCTTGTGTGGTTTATATTCACTTAAAACAGGTAACAG
GTTATCAAAATTATCTAATTATGGGTGATGCGGGGTGGGAAGCAGAATATCAACTTATAAAGGAATATCCCGAGTTAAAG
GTAGATGTTCTGGTATTAGGTCATCATGGGAGTAAGCATAGTTCGGCTTATGATTTTTTAGCCACATTAAAGCCAAAGCT
TGTGATTGCCTCGGCTGGCTTTAATAATCGATATGGGCACCCAAGCAAAGAGGTTTTGGCGAGAGTACAAGCACTTCATA
TTCCGTTTAAAAGCACAGTTGGGCAAGGAACATTAAATTTTGTATCTCGCAATCATGAGATGGTTTTATACACTCGACGT
TTCGAGCGTACTTGGCTTCACAGGAATTTGTGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (555-643)

• Competence protein (Competence) (243-522)

• Domain of unknown function (DUF4131) (DUF4131) (27-188)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/comEC	Acinetobacter baumannii D1279779	70.457	99.877	0.704
comA/comEC	Acinetobacter baumannii strain A118	69.716	99.877	0.696
comA/comEC	Acinetobacter baylyi ADP1	48.897	100	0.493