Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ABWV75_RS01550 Genome accession   NZ_AP031487
Coordinates   315075..315740 (+) Length   221 a.a.
NCBI ID   WP_070508443.1    Uniprot ID   -
Organism   Staphylococcus hominis subsp. novobiosepticus strain NBRC 113928     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 310075..320740
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABWV75_RS01525 (SKB0068_03020) - 310499..311629 (+) 1131 WP_087436281.1 DegT/DnrJ/EryC1/StrS family aminotransferase -
  ABWV75_RS01530 (SKB0068_03030) - 311645..312589 (+) 945 WP_087436282.1 LCP family protein -
  ABWV75_RS01535 (SKB0068_03040) - 312697..314172 (-) 1476 WP_353318779.1 alkaline phosphatase -
  ABWV75_RS01540 (SKB0068_03050) - 314553..314726 (+) 174 WP_175936825.1 hypothetical protein -
  ABWV75_RS01545 (SKB0068_03060) - 314895..315062 (+) 168 WP_002488268.1 hypothetical protein -
  ABWV75_RS01550 (SKB0068_03070) braR 315075..315740 (+) 666 WP_070508443.1 response regulator transcription factor Regulator
  ABWV75_RS01555 (SKB0068_03080) braS 315746..316642 (+) 897 WP_242282542.1 sensor histidine kinase Regulator
  ABWV75_RS01560 (SKB0068_03090) - 316774..317523 (+) 750 WP_353318780.1 ABC transporter ATP-binding protein -
  ABWV75_RS01565 (SKB0068_03100) - 317525..319480 (+) 1956 WP_353318432.1 FtsX-like permease family protein -
  ABWV75_RS01570 (SKB0068_03110) - 319571..320335 (+) 765 WP_353318434.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25438.18 Da        Isoelectric Point: 4.5773

>NTDB_id=109730 ABWV75_RS01550 WP_070508443.1 315075..315740(+) (braR) [Staphylococcus hominis subsp. novobiosepticus strain NBRC 113928]
MKVLIVEDDVVIAESLGNELSHWNYEVSIAKQFDNILEEFKTAEPELVLLDINLPTFNGYHWCQEIRKVSNVPIIFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLTVSNNEITVKGCKLVVDEATLYYNNDSVQLSFTELQILN
KLFQNEGKYVNRTAIIEKCWESENFIDDNTLAVNMTRLRKKLQSIGIVDFIETKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=109730 ABWV75_RS01550 WP_070508443.1 315075..315740(+) (braR) [Staphylococcus hominis subsp. novobiosepticus strain NBRC 113928]
ATGAAAGTATTGATTGTCGAAGATGATGTCGTCATTGCAGAAAGTCTAGGGAATGAACTCTCACATTGGAACTATGAAGT
GAGTATTGCTAAGCAGTTTGATAATATTCTTGAAGAATTTAAAACTGCAGAACCTGAACTTGTGTTATTAGATATTAATT
TACCTACATTTAATGGTTATCATTGGTGCCAAGAGATACGTAAAGTATCTAATGTCCCAATTATTTTCATTAGTTCGCGT
ACTGACAATATGGATCAAATTATGGCAATTCAAATGGGCGGAGATGACTTTATTGAAAAGCCATTTAATTTGTCACTTAC
TATAGCGAAAATTCAAGCATTGCTACGTAGAACATATGATTTAACGGTTTCAAATAATGAGATTACTGTTAAAGGGTGTA
AACTCGTTGTTGATGAAGCCACACTATACTACAACAATGACTCTGTACAACTTTCGTTTACTGAACTACAAATTTTGAAT
AAATTATTTCAAAATGAAGGGAAATATGTCAATCGTACAGCAATCATCGAAAAATGTTGGGAATCAGAGAATTTTATTGA
TGATAATACGTTAGCAGTAAATATGACACGCCTACGTAAAAAGTTGCAATCTATCGGTATTGTTGATTTCATTGAGACAA
AGAAAAATGTAGGGTATAAGGTGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

77.376

100

0.774

Multiple sequence alignment