Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   ABWV75_RS01555 Genome accession   NZ_AP031487
Coordinates   315746..316642 (+) Length   298 a.a.
NCBI ID   WP_242282542.1    Uniprot ID   -
Organism   Staphylococcus hominis subsp. novobiosepticus strain NBRC 113928     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 310746..321642
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABWV75_RS01530 (SKB0068_03030) - 311645..312589 (+) 945 WP_087436282.1 LCP family protein -
  ABWV75_RS01535 (SKB0068_03040) - 312697..314172 (-) 1476 WP_353318779.1 alkaline phosphatase -
  ABWV75_RS01540 (SKB0068_03050) - 314553..314726 (+) 174 WP_175936825.1 hypothetical protein -
  ABWV75_RS01545 (SKB0068_03060) - 314895..315062 (+) 168 WP_002488268.1 hypothetical protein -
  ABWV75_RS01550 (SKB0068_03070) braR 315075..315740 (+) 666 WP_070508443.1 response regulator transcription factor Regulator
  ABWV75_RS01555 (SKB0068_03080) braS 315746..316642 (+) 897 WP_242282542.1 sensor histidine kinase Regulator
  ABWV75_RS01560 (SKB0068_03090) - 316774..317523 (+) 750 WP_353318780.1 ABC transporter ATP-binding protein -
  ABWV75_RS01565 (SKB0068_03100) - 317525..319480 (+) 1956 WP_353318432.1 FtsX-like permease family protein -
  ABWV75_RS01570 (SKB0068_03110) - 319571..320335 (+) 765 WP_353318434.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34666.29 Da        Isoelectric Point: 6.6353

>NTDB_id=109731 ABWV75_RS01555 WP_242282542.1 315746..316642(+) (braS) [Staphylococcus hominis subsp. novobiosepticus strain NBRC 113928]
MLKAFIKSIRHQMMIVALFLLLFLMIFFLFNLPFNAFFLGMAIILFIMIIFWLIQLSGFQEAVSLKEEVADLEDELQRVK
NEQAAYQVNVENYFLTWVHQMKTPITASKLLLERNEDNVVNRVRQEIIQIDNYTSLALSYLKLMNQETDMSFSKVTINDL
VKPLIMKYSIQFIDQKTTIHYTRCEDEVLTDVQWCTIMIEQILNNALKYARGKDIWITFNNENHVLSIRDNGVGISKADL
PKIFDKGYSGYNGRLHQHSSGIGLFIVKHISAHLHHKVEVSSTLHEGTTFDIHFPENN

Nucleotide


Download         Length: 897 bp        

>NTDB_id=109731 ABWV75_RS01555 WP_242282542.1 315746..316642(+) (braS) [Staphylococcus hominis subsp. novobiosepticus strain NBRC 113928]
ATGTTAAAAGCGTTTATAAAATCGATACGTCATCAAATGATGATAGTAGCTTTATTTCTATTACTTTTCTTGATGATTTT
CTTTCTTTTTAATTTGCCTTTCAATGCATTCTTTCTAGGTATGGCAATTATTCTTTTTATAATGATTATTTTTTGGTTGA
TTCAACTTAGTGGATTTCAAGAAGCAGTGTCTTTAAAAGAAGAAGTTGCTGACTTAGAAGATGAATTACAACGTGTAAAA
AATGAACAAGCTGCATACCAAGTCAATGTTGAGAACTATTTTTTAACATGGGTGCATCAAATGAAGACACCTATTACCGC
TTCAAAACTCCTTCTAGAAAGAAATGAAGATAATGTAGTAAATCGTGTGCGTCAAGAAATTATACAAATTGATAACTATA
CGAGTCTTGCACTCAGCTATTTAAAATTGATGAATCAAGAAACGGATATGTCCTTTTCAAAAGTGACCATTAACGATCTC
GTTAAACCTCTTATTATGAAATATTCGATTCAATTCATCGACCAAAAAACAACCATTCATTACACACGTTGTGAAGATGA
AGTACTGACTGATGTTCAATGGTGTACGATCATGATAGAACAAATTCTTAATAATGCTTTGAAATATGCACGAGGTAAAG
ATATTTGGATTACTTTCAACAACGAAAATCATGTGCTATCTATACGAGATAACGGTGTAGGAATTAGTAAAGCCGATCTT
CCCAAAATTTTCGATAAAGGGTACTCAGGCTATAACGGAAGACTTCATCAACATTCAAGTGGCATTGGATTATTTATTGT
TAAACATATATCGGCACATTTACATCATAAAGTAGAAGTGTCTTCAACGCTCCATGAAGGAACTACATTTGACATACATT
TCCCAGAAAATAATTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(195-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

59.727

98.322

0.587

Multiple sequence alignment