Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   ACK2OW_RS09845 Genome accession   NZ_CP180575
Coordinates   1833240..1833359 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain K3C     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 1828240..1838359
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACK2OW_RS09820 (ACK2OW_09820) albG 1828404..1829105 (+) 702 WP_416042659.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  ACK2OW_RS09825 (ACK2OW_09825) ywhL 1829111..1830487 (-) 1377 WP_416042660.1 YncE family protein -
  ACK2OW_RS09830 (ACK2OW_09830) ywhK 1830526..1831881 (-) 1356 WP_416042661.1 YncE family protein -
  ACK2OW_RS09835 (ACK2OW_09835) - 1831878..1832108 (-) 231 WP_041334639.1 hypothetical protein -
  ACK2OW_RS09840 (ACK2OW_09840) rapF 1832111..1833256 (+) 1146 WP_416042662.1 response regulator aspartate phosphatase RapF Regulator
  ACK2OW_RS09845 (ACK2OW_09845) phrF 1833240..1833359 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  ACK2OW_RS09850 (ACK2OW_09850) ywhH 1833457..1833928 (+) 472 Protein_1954 YbaK/EbsC family protein -
  ACK2OW_RS09855 (ACK2OW_09855) speB 1833959..1834831 (-) 873 WP_232566994.1 agmatinase -
  ACK2OW_RS09860 (ACK2OW_09860) speE 1834892..1835722 (-) 831 WP_003227543.1 spermidine synthase -
  ACK2OW_RS09865 (ACK2OW_09865) pbpG 1835924..1837999 (+) 2076 WP_172861279.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=1096778 ACK2OW_RS09845 WP_009968329.1 1833240..1833359(+) (phrF) [Bacillus subtilis strain K3C]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=1096778 ACK2OW_RS09845 WP_009968329.1 1833240..1833359(+) (phrF) [Bacillus subtilis strain K3C]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment