Detailed information NTG1096777

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ACK2OW_RS09840
• Genome accession: NZ_CP180575
• Coordinates: 1832111..1833256 (+)
• Length: 381 a.a.
• NCBI ID: WP_416042662.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain K3C
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1827111..1838256

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACK2OW_RS09815 (ACK2OW_09815)	albF	1827127..1828407 (+)	1281	WP_416042658.1	M16 family metallopeptidase	-
ACK2OW_RS09820 (ACK2OW_09820)	albG	1828404..1829105 (+)	702	WP_416042659.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
ACK2OW_RS09825 (ACK2OW_09825)	ywhL	1829111..1830487 (-)	1377	WP_416042660.1	YncE family protein	-
ACK2OW_RS09830 (ACK2OW_09830)	ywhK	1830526..1831881 (-)	1356	WP_416042661.1	YncE family protein	-
ACK2OW_RS09835 (ACK2OW_09835)	-	1831878..1832108 (-)	231	WP_041334639.1	hypothetical protein	-
ACK2OW_RS09840 (ACK2OW_09840)	rapF	1832111..1833256 (+)	1146	WP_416042662.1	response regulator aspartate phosphatase RapF	Regulator
ACK2OW_RS09845 (ACK2OW_09845)	phrF	1833240..1833359 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
ACK2OW_RS09850 (ACK2OW_09850)	ywhH	1833457..1833928 (+)	472	Protein_1954	YbaK/EbsC family protein	-
ACK2OW_RS09855 (ACK2OW_09855)	speB	1833959..1834831 (-)	873	WP_232566994.1	agmatinase	-
ACK2OW_RS09860 (ACK2OW_09860)	speE	1834892..1835722 (-)	831	WP_003227543.1	spermidine synthase	-
ACK2OW_RS09865 (ACK2OW_09865)	pbpG	1835924..1837999 (+)	2076	WP_172861279.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45581.04 Da
• Isoelectric Point: 5.1475

>NTDB_id=1096777 ACK2OW_RS09840 WP_416042662.1 1832111..1833256(+) (rapF) [Bacillus subtilis strain K3C]
MTGVISSSSIGEKINEWYIYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGVLDYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=1096777 ACK2OW_RS09840 WP_416042662.1 1832111..1833256(+) (rapF) [Bacillus subtilis strain K3C]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATTTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTAATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGAGTCCTTGATTATTACTTTAATTTCTTCAG
GGGCATGTATGAACTTGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

• Tetratricopeptide repeat (TPR_12) (223-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.95	100	0.99
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572