Detailed information NTG1096289

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: ACLKMS_RS11415
• Genome accession: NZ_CP180533
• Coordinates: 2389024..2389533 (-)
• Length: 169 a.a.
• NCBI ID: WP_001831333.1
• Uniprot ID: A0A2G7I1N0
• Organism: Staphylococcus epidermidis strain BP21
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 2384024..2394533

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLKMS_RS11370 (ACLKMS_11370)	-	2384238..2384861 (+)	624	WP_002456828.1	NDxxF motif lipoprotein	-
ACLKMS_RS11375 (ACLKMS_11375)	-	2385081..2385458 (+)	378	WP_002437185.1	hypothetical protein	-
ACLKMS_RS11380 (ACLKMS_11380)	-	2385816..2386406 (-)	591	WP_002456826.1	histidine phosphatase family protein	-
ACLKMS_RS11385 (ACLKMS_11385)	-	2386427..2387059 (-)	633	WP_001830914.1	LysE family translocator	-
ACLKMS_RS11390 (ACLKMS_11390)	-	2387222..2387311 (+)	90	Protein_2193	hypothetical protein	-
ACLKMS_RS11395 (ACLKMS_11395)	-	2387531..2387785 (-)	255	WP_001832461.1	GlsB/YeaQ/YmgE family stress response membrane protein	-
ACLKMS_RS11400 (ACLKMS_11400)	-	2388007..2388267 (+)	261	WP_001830921.1	hypothetical protein	-
ACLKMS_RS11405 (ACLKMS_11405)	-	2388381..2388553 (+)	173	Protein_2196	XRE family transcriptional regulator	-
ACLKMS_RS11410 (ACLKMS_11410)	rpsR	2388737..2388979 (-)	243	WP_001831354.1	30S ribosomal protein S18	-
ACLKMS_RS11415 (ACLKMS_11415)	ssbA	2389024..2389533 (-)	510	WP_001831333.1	single-stranded DNA-binding protein	Machinery gene
ACLKMS_RS11420 (ACLKMS_11420)	rpsF	2389556..2389852 (-)	297	WP_001831345.1	30S ribosomal protein S6	-
ACLKMS_RS11425 (ACLKMS_11425)	-	2390237..2391046 (+)	810	WP_002455908.1	GH25 family lysozyme	-
ACLKMS_RS11430 (ACLKMS_11430)	-	2391120..2391311 (+)	192	WP_001831355.1	hypothetical protein	-
ACLKMS_RS11435 (ACLKMS_11435)	ychF	2391544..2392641 (-)	1098	WP_001831336.1	redox-regulated ATPase YchF	-
ACLKMS_RS11440 (ACLKMS_11440)	-	2392653..2392856 (-)	204	WP_001831361.1	DUF951 domain-containing protein	-
ACLKMS_RS11445 (ACLKMS_11445)	-	2392877..2393752 (-)	876	WP_001832526.1	mechanosensitive ion channel family protein	-

Sequence

Protein

• Length: 169 a.a.
• Molecular weight: 18680.20 Da
• Isoelectric Point: 4.9056

>NTDB_id=1096289 ACLKMS_RS11415 WP_001831333.1 2389024..2389533(-) (ssbA) [Staphylococcus epidermidis strain BP21]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQAENVNNYLSKGSLAGVDGRIQSR
SYENQEGRRIFVTEVVCDSVQFLEPKNAQHGGQRSQNNNFQDYGQGFGGQQSGQNTSYNNNNSSNSNQSDNPFANANGPI
DISDDDLPF

Nucleotide

• Length: 510 bp

>NTDB_id=1096289 ACLKMS_RS11415 WP_001831333.1 2389024..2389533(-) (ssbA) [Staphylococcus epidermidis strain BP21]
ATGTTAAATCGAGTTGTATTAGTAGGTCGTCTAACGAAAGATCCAGAATACAGAACCACACCCTCAGGCGTAAGTGTAGC
GACATTTACTCTAGCAGTTAATCGTACTTTCACGAATGCTCAAGGGGAACGCGAAGCTGACTTTATTAACTGTGTAGTCT
TCCGTAGACAAGCAGAAAATGTAAATAACTACTTGTCTAAAGGTAGTTTAGCTGGCGTTGATGGTCGCATACAATCACGT
AGTTATGAAAATCAAGAAGGTCGTCGTATTTTTGTTACTGAAGTCGTATGTGATAGTGTTCAGTTCCTTGAACCTAAAAA
TGCACAACATGGTGGCCAACGTTCACAGAACAATAATTTCCAAGACTACGGTCAAGGATTTGGTGGTCAGCAATCAGGAC
AAAATACATCTTACAACAACAATAATTCATCAAACTCAAATCAGTCGGATAATCCGTTTGCAAATGCTAATGGACCGATT
GATATCAGTGATGATGATTTACCATTCTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

3D structure

• AlphaFold DB: A0A2G7I1N0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	64.607	100	0.68
ssb	Latilactobacillus sakei subsp. sakei 23K	55.172	100	0.568
ssbB	Bacillus subtilis subsp. subtilis str. 168	60.377	62.722	0.379