Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   ACGHT2_RS07970 Genome accession   NZ_AP031455
Coordinates   1523306..1524307 (-) Length   333 a.a.
NCBI ID   WP_058692408.1    Uniprot ID   -
Organism   Streptococcus pasteurianus strain k46-0107-A9     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1518306..1529307
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACGHT2_RS07955 (K460107A9_14810) thrS 1518582..1520528 (-) 1947 WP_041974366.1 threonine--tRNA ligase -
  ACGHT2_RS07960 (K460107A9_14820) - 1520878..1522212 (-) 1335 WP_390578281.1 glycosyltransferase family 4 protein -
  ACGHT2_RS07965 (K460107A9_14830) - 1522214..1523212 (-) 999 WP_058692407.1 glycosyltransferase family 4 protein -
  ACGHT2_RS07970 (K460107A9_14840) ccpA 1523306..1524307 (-) 1002 WP_058692408.1 catabolite control protein A Regulator
  ACGHT2_RS07975 (K460107A9_14850) - 1524635..1525720 (+) 1086 WP_003065805.1 Xaa-Pro peptidase family protein -
  ACGHT2_RS07980 (K460107A9_14870) - 1526059..1526241 (+) 183 WP_238374695.1 NUDIX domain-containing protein -
  ACGHT2_RS07985 (K460107A9_14880) - 1526251..1526424 (-) 174 WP_231729907.1 hypothetical protein -
  ACGHT2_RS07990 (K460107A9_14890) - 1526606..1527355 (-) 750 WP_039695052.1 ChbG/HpnK family deacetylase -
  ACGHT2_RS07995 (K460107A9_14900) - 1527365..1528768 (-) 1404 WP_003065816.1 PTS transporter subunit EIIC -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36510.56 Da        Isoelectric Point: 5.0313

>NTDB_id=109626 ACGHT2_RS07970 WP_058692408.1 1523306..1524307(-) (ccpA) [Streptococcus pasteurianus strain k46-0107-A9]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPVVLAGTVDLEHQLPS
VNIDYKAAVVDVVDILAKSNKEIAFVSGPLIDDINGKVRLAGYKEGLEKNGLSFKEGLVFEANYNYKDGFELAQRVINSG
ATAAFVAEDELAAGLLNGLFEAGKKVPEDFEIITSNDSPITSYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGLITRGTTR

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=109626 ACGHT2_RS07970 WP_058692408.1 1523306..1524307(-) (ccpA) [Streptococcus pasteurianus strain k46-0107-A9]
ATGAACACTGATGATACGATTACAATTTATGACGTTGCCCGAGAAGCAGGCGTCTCTATGGCAACAGTTAGTCGTGTTGT
AAATGGCAATAAAAACGTAAAGGAAAACACACGTAAGAAAGTTCTTGAAGTTATTGATCGTTTGGATTATCGTCCAAATG
CCGTTGCCCGCGGTTTAGCAAGTAAAAAGACAACAACAGTAGGTGTTGTTATTCCCAATATTGCCAATAGCTATTTCTCA
ATTCTTGCTAAAGGAATTGATGATATTGCCGCTATGTACAAGTATAATATCGTACTTGCTTCAAGTGATGAAGATGATGA
TAAGGAGGTTAACGTTGTTAACACCTTGTTTGCTAAACAAGTTGACGGTATTATCTTCATGGGACATCATTTGACTGAAA
AAATTCGTGCAGAGTTCTCTCGCTCACGCACACCAGTTGTACTTGCGGGTACAGTTGACTTAGAACACCAACTCCCAAGT
GTTAATATTGATTACAAAGCAGCGGTTGTTGATGTTGTTGATATTTTAGCTAAAAGCAATAAAGAAATTGCCTTTGTTTC
TGGTCCACTTATCGATGATATCAACGGTAAAGTGCGTTTAGCTGGTTACAAAGAAGGTCTTGAAAAAAATGGCTTATCAT
TCAAAGAAGGTCTTGTCTTTGAAGCTAATTACAACTATAAAGATGGATTTGAACTTGCACAACGTGTGATTAATTCTGGC
GCAACAGCAGCCTTTGTTGCCGAAGACGAATTGGCAGCAGGCTTACTGAACGGCTTGTTCGAAGCTGGCAAAAAAGTTCC
AGAAGACTTTGAAATCATCACAAGCAATGATTCACCAATTACATCATACACACGCCCAAACCTTAGCTCAATCAGTCAAC
CAGTTTATGACCTTGGTGCTGTCAGCATGCGTATGTTGACTAAAATCATGAACAAAGAGGAACTTGAAGAAAAAGAAATT
CTTCTTAACCATGGTCTTATAACACGTGGCACAACACGTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

80.48

100

0.805

  ccpA Streptococcus pneumoniae D39

78.078

100

0.781

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.891

99.399

0.556


Multiple sequence alignment