Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | ACMZ68_RS16420 | Genome accession | NZ_CP180522 |
| Coordinates | 3438970..3439443 (-) | Length | 157 a.a. |
| NCBI ID | WP_005067119.1 | Uniprot ID | - |
| Organism | Acinetobacter pittii strain AP5091 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3433970..3444443
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACMZ68_RS16405 (ACMZ68_16405) | pilX | 3436609..3437418 (-) | 810 | WP_002117088.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| ACMZ68_RS16410 (ACMZ68_16410) | pilW | 3437415..3438416 (-) | 1002 | WP_415871444.1 | PilW family protein | Machinery gene |
| ACMZ68_RS16415 (ACMZ68_16415) | pilV | 3438416..3438976 (-) | 561 | WP_078219781.1 | type IV pilus modification protein PilV | Machinery gene |
| ACMZ68_RS16420 (ACMZ68_16420) | fimU | 3438970..3439443 (-) | 474 | WP_005067119.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| ACMZ68_RS16425 (ACMZ68_16425) | ispH | 3439613..3440563 (-) | 951 | WP_002116992.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| ACMZ68_RS16430 (ACMZ68_16430) | gmk | 3440687..3441316 (+) | 630 | WP_415871445.1 | guanylate kinase | - |
| ACMZ68_RS16435 (ACMZ68_16435) | rpoZ | 3441389..3441667 (+) | 279 | WP_002116990.1 | DNA-directed RNA polymerase subunit omega | - |
| ACMZ68_RS16440 (ACMZ68_16440) | - | 3441706..3441861 (+) | 156 | Protein_3205 | hypothetical protein | - |
| ACMZ68_RS16445 (ACMZ68_16445) | spoT | 3441877..3443982 (+) | 2106 | WP_415871446.1 | RelA/SpoT family protein | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16912.60 Da Isoelectric Point: 7.7942
>NTDB_id=1096203 ACMZ68_RS16420 WP_005067119.1 3438970..3439443(-) (fimU) [Acinetobacter pittii strain AP5091]
MRGIIPQDGFTLVELMVTIAVMAIIAMMAAPSMSNLLESKRLDGNQRDLINTLSEAKSQAILGRQDVSINLNSTALNTPT
SLNWKADSNNSLELKNIAADGTQSSLTATTLTFNANGVITNITQDTLLSICNSKINKKKILILTKLGTLIFKAEETC
MRGIIPQDGFTLVELMVTIAVMAIIAMMAAPSMSNLLESKRLDGNQRDLINTLSEAKSQAILGRQDVSINLNSTALNTPT
SLNWKADSNNSLELKNIAADGTQSSLTATTLTFNANGVITNITQDTLLSICNSKINKKKILILTKLGTLIFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=1096203 ACMZ68_RS16420 WP_005067119.1 3438970..3439443(-) (fimU) [Acinetobacter pittii strain AP5091]
ATGAGGGGAATTATTCCGCAAGATGGATTCACCTTGGTTGAGCTTATGGTGACGATTGCGGTCATGGCTATTATTGCGAT
GATGGCTGCACCATCTATGTCGAATTTATTAGAAAGCAAACGACTAGATGGAAACCAACGAGATCTAATCAATACTTTAT
CGGAAGCAAAGAGCCAAGCCATACTTGGTCGACAAGACGTTTCTATTAATCTGAATTCAACAGCTTTAAATACTCCCACT
TCCTTGAATTGGAAAGCTGATTCCAATAACAGTCTTGAGCTTAAAAATATCGCTGCTGATGGTACGCAGAGTTCGTTAAC
AGCGACGACTTTAACTTTTAATGCGAATGGGGTGATAACTAATATTACCCAAGACACGCTTTTATCTATTTGTAATTCAA
AAATAAATAAAAAGAAAATTCTTATTTTAACAAAGCTTGGCACATTAATTTTTAAAGCTGAGGAGACATGTTAA
ATGAGGGGAATTATTCCGCAAGATGGATTCACCTTGGTTGAGCTTATGGTGACGATTGCGGTCATGGCTATTATTGCGAT
GATGGCTGCACCATCTATGTCGAATTTATTAGAAAGCAAACGACTAGATGGAAACCAACGAGATCTAATCAATACTTTAT
CGGAAGCAAAGAGCCAAGCCATACTTGGTCGACAAGACGTTTCTATTAATCTGAATTCAACAGCTTTAAATACTCCCACT
TCCTTGAATTGGAAAGCTGATTCCAATAACAGTCTTGAGCTTAAAAATATCGCTGCTGATGGTACGCAGAGTTCGTTAAC
AGCGACGACTTTAACTTTTAATGCGAATGGGGTGATAACTAATATTACCCAAGACACGCTTTTATCTATTTGTAATTCAA
AAATAAATAAAAAGAAAATTCTTATTTTAACAAAGCTTGGCACATTAATTTTTAAAGCTGAGGAGACATGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
88.535 |
100 |
0.885 |