Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   ACMZ68_RS05565 Genome accession   NZ_CP180522
Coordinates   1181047..1181754 (-) Length   235 a.a.
NCBI ID   WP_005070320.1    Uniprot ID   A0A009I7W0
Organism   Acinetobacter pittii strain AP5091     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1176047..1186754
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACMZ68_RS05545 (ACMZ68_05545) purA 1177129..1178448 (+) 1320 WP_044101722.1 adenylosuccinate synthase -
  ACMZ68_RS05550 (ACMZ68_05550) - 1178571..1178888 (+) 318 WP_002121533.1 hypothetical protein -
  ACMZ68_RS05555 (ACMZ68_05555) - 1179004..1179783 (+) 780 WP_002121572.1 M48 family metallopeptidase -
  ACMZ68_RS05560 (ACMZ68_05560) tas 1179838..1180887 (-) 1050 WP_415871874.1 NADP(H)-dependent aldo-keto reductase -
  ACMZ68_RS05565 (ACMZ68_05565) crp 1181047..1181754 (-) 708 WP_005070320.1 cAMP-activated global transcriptional regulator CRP Regulator
  ACMZ68_RS05570 (ACMZ68_05570) - 1181995..1182114 (+) 120 WP_002121587.1 hypothetical protein -
  ACMZ68_RS05575 (ACMZ68_05575) - 1182193..1182615 (+) 423 WP_002121528.1 OsmC family protein -
  ACMZ68_RS05580 (ACMZ68_05580) phnO 1182714..1183139 (+) 426 WP_270907519.1 GNAT family N-acetyltransferase -
  ACMZ68_RS05585 (ACMZ68_05585) - 1183136..1183945 (-) 810 WP_415871875.1 peptidoglycan DD-metalloendopeptidase family protein -

Sequence

Protein


Download         Length: 235 a.a.        Molecular weight: 26526.09 Da        Isoelectric Point: 4.6573

>NTDB_id=1096184 ACMZ68_RS05565 WP_005070320.1 1181047..1181754(-) (crp) [Acinetobacter pittii strain AP5091]
MTSNFSQLSTDALSPGQLPESVKALLKRAHINRYPKRTTIVDAGTESKSLYLILKGSVSIILREDDEREIVVAYLNPGDF
FGEMGLFEPNPQRTAEVRTRDVCEIAEISYDNFHELSKQYPDLSYAVFAQLVRRLKNTTRKMTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEDQGMIQTDGKAILIFDASLEENTVSDDDYDDEE

Nucleotide


Download         Length: 708 bp        

>NTDB_id=1096184 ACMZ68_RS05565 WP_005070320.1 1181047..1181754(-) (crp) [Acinetobacter pittii strain AP5091]
ATGACTTCAAATTTTTCACAACTCAGCACAGATGCTTTATCTCCGGGGCAACTACCTGAATCCGTTAAAGCATTGTTAAA
ACGTGCTCACATCAACAGATATCCAAAACGAACCACAATTGTTGATGCCGGAACAGAGTCAAAATCTTTATATTTAATTT
TAAAAGGCTCAGTTTCAATTATTTTGCGTGAAGATGACGAACGTGAAATTGTTGTTGCGTATTTAAATCCGGGCGATTTC
TTTGGGGAAATGGGGCTTTTCGAACCGAACCCTCAACGTACAGCCGAAGTTCGAACTCGTGATGTCTGTGAAATTGCAGA
GATCTCTTATGACAACTTCCACGAACTTAGCAAACAATACCCAGACTTAAGCTATGCTGTTTTTGCACAATTAGTTCGCC
GTCTAAAAAATACGACTCGTAAAATGACAGATCTTGCGTTCATTGATGTGTCTGGTCGTATTGCACGTTGCTTAATCGAT
CTATCTTCTCAACCAGAAGCAATGATTTTGCCGAATGGTCGTCAAATTCGTATTACTCGTCAAGAAATTGGCCGTATTGT
TGGATGTTCACGTGAGATGGTTGGTCGTGTACTCAAAACCTTAGAAGATCAAGGTATGATCCAAACTGATGGTAAAGCCA
TTCTTATTTTTGATGCATCATTAGAAGAAAACACTGTTTCTGATGATGACTACGATGATGAAGAATAA

Domains

Predicted by InterproScan.

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)

Crp-like helix-turn-helix domain (HTH_Crp_2)

(152-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A009I7W0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

97.447

100

0.974
  crp Vibrio cholerae strain A1552

47.087

87.66

0.413
  crp Haemophilus influenzae Rd KW20

48.718

82.979

0.404

Multiple sequence alignment