Detailed information NTG1095971

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: ACMYQ0_RS04555
• Genome accession: NZ_CP180477
• Coordinates: 958739..960961 (+)
• Length: 740 a.a.
• NCBI ID: WP_415755023.1
• Uniprot ID: -
• Organism: Pseudomonas leptonychotis strain CCM 8849
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 953739..965961

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMYQ0_RS04525	-	953827..954129 (-)	303	WP_415755022.1	phosphodiesterase	-
ACMYQ0_RS04530	-	954148..954723 (-)	576	WP_136666074.1	PilZ domain-containing protein	-
ACMYQ0_RS04535	-	954819..956069 (+)	1251	WP_136666072.1	lipoprotein-releasing ABC transporter permease subunit	-
ACMYQ0_RS04540	lolD	956092..956775 (+)	684	WP_415755881.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
ACMYQ0_RS04545	-	956775..958019 (+)	1245	WP_136666069.1	lipoprotein-releasing ABC transporter permease subunit	-
ACMYQ0_RS04550	-	958071..958604 (-)	534	WP_136666068.1	DUF2062 domain-containing protein	-
ACMYQ0_RS04555	comA	958739..960961 (+)	2223	WP_415755023.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ACMYQ0_RS04560	exbB	961034..961666 (+)	633	WP_136666066.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
ACMYQ0_RS04565	-	961663..962091 (+)	429	WP_136666064.1	ExbD/TolR family protein	-
ACMYQ0_RS04570	lpxK	962105..963106 (+)	1002	WP_415755024.1	tetraacyldisaccharide 4'-kinase	-
ACMYQ0_RS04575	-	963168..963353 (+)	186	WP_405120604.1	Trm112 family protein	-
ACMYQ0_RS04580	kdsB	963354..964118 (+)	765	WP_415755025.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ACMYQ0_RS04585	-	964118..964582 (+)	465	WP_415755026.1	low molecular weight protein-tyrosine-phosphatase	-
ACMYQ0_RS04590	murB	964579..965598 (+)	1020	WP_415755027.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 740 a.a.
• Molecular weight: 80183.19 Da
• Isoelectric Point: 9.7622

>NTDB_id=1095971 ACMYQ0_RS04555 WP_415755023.1 958739..960961(+) (comA) [Pseudomonas leptonychotis strain CCM 8849]
MRTGILALVIGLLVLRFLPALPPFWLLAVLSAAGVMLLPFRSYPIALLLFGFTWACVCAQWALDDRLAPQLDTRTLWLQG
QVVGLPEVTDGVVRFQIEQAVSRRDKLPARLRLSWYGGPAIRAGETWRLAVRLKRPHGLVNPQAFDYEAWLLAQRIGATG
TVKSGELLTPASGAGAWRDRVRQRVLATPAHGRAGALAALVLGDDSGLSAADWQVLQNTGTVHLMVISGQHIGLLATLLY
GLVAGLARLGVWPRGWPWLPCACVLACAGALVYGLLAGFEVPVQRACAMVALVLLWRWRFRHLGVWLPLLLALLAVLLWE
PLASLQPGFWLSFGAVLLLILIFSGRLGAWSWWGTLLRAQWAMAIGLLPLLLALGLPVSASGPLANLVAVPVVGLLIVPL
ALLGTLLLPVAGVGAALLEGAGWLLHLLFTLLTQLAWWLPAWLPSALPFWAWLLVSVGALVLLLPAALPVRSLGVLMLLP
VLFTPQLRPEYGRAEVWMLDVGQGLAVLVRTQGHELLYDAGPRFGEFDTGERVVLPSLRALDVRGLDLLLLSHADNDHAG
GGVAVSRGLPTQRVLSGEPDKLAPSLEAQSCSRTHWQWEGVRFSTWLWTDATNGNQASCVLRVEANGERLWLTGDIDSQA
EQALLSSGLSMPAHWLLAPHHGSRSSSSASLLAQVKPSSALISRGAHNTFGHPHAEVVARYRAQGARLYDTALHGAVRIH
LGAFEQAQGLRDHARFWREK

Nucleotide

• Length: 2223 bp

>NTDB_id=1095971 ACMYQ0_RS04555 WP_415755023.1 958739..960961(+) (comA) [Pseudomonas leptonychotis strain CCM 8849]
ATGCGTACAGGAATTTTGGCGCTGGTAATTGGGCTGTTGGTGCTGCGCTTTCTTCCGGCCCTGCCACCGTTCTGGCTTTT
GGCTGTTCTGTCGGCAGCAGGCGTGATGCTATTGCCGTTTCGCAGTTATCCCATCGCCTTGTTGCTGTTTGGTTTCACTT
GGGCCTGTGTATGCGCGCAGTGGGCTTTGGATGATCGTCTGGCGCCGCAGCTGGACACCCGTACCCTCTGGCTGCAAGGG
CAGGTGGTCGGTCTGCCCGAGGTGACTGATGGAGTGGTGCGTTTCCAAATTGAACAGGCGGTTTCACGTCGCGATAAATT
GCCGGCCCGATTGCGCCTGTCTTGGTATGGCGGGCCTGCTATACGTGCGGGGGAGACCTGGCGTTTAGCGGTAAGGCTTA
AGCGCCCTCATGGTTTAGTCAACCCTCAAGCATTTGATTACGAAGCTTGGCTGTTGGCGCAACGCATTGGCGCGACGGGT
ACGGTGAAAAGTGGCGAGCTGCTTACACCTGCAAGCGGTGCCGGTGCATGGCGTGACCGCGTGCGTCAGCGCGTTTTGGC
AACCCCTGCGCATGGCCGTGCAGGGGCGTTGGCCGCTTTGGTGCTAGGTGATGACTCAGGGTTGTCGGCAGCGGACTGGC
AGGTGCTGCAAAACACCGGCACGGTGCACTTAATGGTGATTTCCGGCCAACATATCGGTCTTTTGGCGACACTTTTGTAT
GGTCTTGTCGCCGGGCTGGCGCGCCTCGGTGTGTGGCCGCGTGGCTGGCCCTGGCTGCCCTGTGCTTGCGTATTGGCCTG
TGCGGGTGCTCTGGTTTATGGGTTGTTGGCCGGGTTCGAGGTGCCTGTGCAGCGTGCGTGCGCGATGGTGGCTCTGGTAT
TGCTCTGGCGTTGGCGCTTTCGTCATCTGGGCGTGTGGTTACCCTTATTGTTGGCATTGCTGGCGGTGTTGCTGTGGGAG
CCACTGGCCAGTTTGCAGCCAGGATTCTGGTTGTCATTTGGCGCTGTGCTGCTTTTGATTCTGATTTTTAGTGGCCGGTT
GGGCGCCTGGTCTTGGTGGGGAACCTTGCTGCGCGCGCAATGGGCCATGGCCATTGGTTTGTTGCCGTTACTCTTGGCGC
TTGGCTTGCCGGTAAGTGCCAGTGGGCCATTGGCTAATTTGGTTGCCGTACCTGTAGTGGGTCTGCTGATCGTGCCCTTA
GCATTGCTCGGTACGCTATTGCTGCCCGTGGCCGGGGTCGGTGCTGCGTTGCTTGAGGGTGCTGGCTGGTTGTTGCATCT
GCTGTTCACGCTACTCACGCAACTGGCCTGGTGGCTGCCGGCCTGGTTACCCAGTGCTTTGCCATTTTGGGCCTGGCTGC
TGGTGTCGGTTGGGGCGCTGGTATTGCTCCTGCCTGCTGCTCTGCCAGTGCGCAGTCTGGGTGTGTTGATGCTGCTGCCT
GTGTTGTTCACTCCGCAGCTACGACCTGAGTATGGGCGGGCGGAGGTGTGGATGCTGGATGTGGGTCAAGGGCTGGCAGT
GCTAGTGCGGACCCAGGGGCACGAGCTGTTGTATGACGCCGGTCCACGCTTTGGCGAGTTTGATACCGGCGAGCGAGTCG
TGTTGCCGTCCTTGCGCGCATTAGATGTGCGCGGGCTCGACCTGCTATTGCTGAGCCATGCCGATAACGATCATGCCGGG
GGTGGCGTTGCAGTCTCGCGAGGTTTACCGACCCAGCGCGTGCTCAGTGGCGAGCCTGATAAGTTGGCGCCTTCGTTAGA
GGCTCAGTCGTGCAGTCGTACTCATTGGCAGTGGGAAGGCGTGCGCTTCAGCACCTGGCTATGGACTGACGCCACCAATG
GCAATCAGGCGTCCTGCGTGTTGCGTGTCGAGGCCAATGGTGAGCGCTTGTGGCTGACAGGGGATATAGACAGCCAGGCT
GAGCAGGCCCTGTTAAGCAGCGGTCTGTCGATGCCGGCCCACTGGTTGTTGGCCCCCCATCACGGCAGCCGCAGCTCATC
GTCCGCCTCGTTGCTGGCGCAGGTTAAACCATCGTCGGCGTTGATTTCCCGCGGTGCGCACAACACTTTTGGGCATCCTC
ATGCCGAGGTGGTCGCCCGTTACCGAGCGCAGGGCGCGCGTCTGTACGACACTGCGTTGCACGGTGCGGTGCGGATTCAC
TTAGGTGCATTCGAGCAGGCGCAGGGTTTGCGTGACCATGCACGCTTTTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-684)

• Domain of unknown function (DUF4131) (DUF4131) (23-167)

• Competence protein (Competence) (200-465)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	65.833	97.297	0.641
comA	Ralstonia pseudosolanacearum GMI1000	35.071	100	0.4