Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | ACGHT2_RS00775 | Genome accession | NZ_AP031455 |
| Coordinates | 113411..114382 (+) | Length | 323 a.a. |
| NCBI ID | WP_117479470.1 | Uniprot ID | - |
| Organism | Streptococcus pasteurianus strain k46-0107-A9 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 108411..119382
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACGHT2_RS00735 (K460107A9_00930) | - | 109335..109697 (+) | 363 | WP_058692629.1 | DUF1033 family protein | - |
| ACGHT2_RS00740 (K460107A9_00940) | comYA | 109768..110709 (+) | 942 | WP_003062917.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACGHT2_RS00745 (K460107A9_00950) | comYB | 110633..111676 (+) | 1044 | WP_003062919.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ACGHT2_RS00750 (K460107A9_00960) | comYC | 111676..111969 (+) | 294 | WP_003062921.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ACGHT2_RS00755 (K460107A9_00970) | comYD | 111953..112384 (+) | 432 | WP_058692630.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ACGHT2_RS00760 (K460107A9_00980) | comGE | 112338..112631 (+) | 294 | WP_081048608.1 | competence type IV pilus minor pilin ComGE | - |
| ACGHT2_RS00765 (K460107A9_00990) | comYF | 112585..113052 (+) | 468 | WP_058692632.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ACGHT2_RS00770 (K460107A9_01000) | comYG | 113006..113356 (+) | 351 | WP_238374707.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| ACGHT2_RS00775 (K460107A9_01010) | comYH | 113411..114382 (+) | 972 | WP_117479470.1 | class I SAM-dependent methyltransferase | Machinery gene |
| ACGHT2_RS00780 (K460107A9_01020) | - | 114420..115619 (+) | 1200 | WP_058692635.1 | acetate kinase | - |
| ACGHT2_RS00785 (K460107A9_01030) | - | 115786..115986 (+) | 201 | WP_058692636.1 | helix-turn-helix transcriptional regulator | - |
| ACGHT2_RS00790 (K460107A9_01040) | - | 115996..116202 (+) | 207 | WP_058692637.1 | hypothetical protein | - |
| ACGHT2_RS00795 (K460107A9_01050) | - | 116217..116645 (+) | 429 | WP_238374708.1 | ABC transporter permease | - |
| ACGHT2_RS00800 (K460107A9_01060) | - | 116657..117292 (+) | 636 | WP_058692639.1 | CPBP family intramembrane glutamic endopeptidase | - |
| ACGHT2_RS00805 (K460107A9_01070) | proC | 117336..118106 (-) | 771 | WP_058692640.1 | pyrroline-5-carboxylate reductase | - |
| ACGHT2_RS00810 (K460107A9_01080) | pepA | 118167..119234 (-) | 1068 | WP_058692641.1 | glutamyl aminopeptidase | - |
Sequence
Protein
Download Length: 323 a.a. Molecular weight: 36622.67 Da Isoelectric Point: 4.4130
>NTDB_id=109591 ACGHT2_RS00775 WP_117479470.1 113411..114382(+) (comYH) [Streptococcus pasteurianus strain k46-0107-A9]
MNFEKIETAYELILENIQLIENELKTHIYDALIEQNSFYLGAEGASEEVAANNEKLRQLALTKEEWRRAFQFIFIKAGQT
EQLQANHQFTPDAIGFILLFLIENLTDSDKIDLLEIGSGTGNLAQTFLNNSSKELNYLGIEVDDLLIDLSASIAEVMDSD
ARFIQEDAVRPQILQESDVIISDLPVGFYPNDDIAKRYKVASSDEHTYAHHLLMEQSLKYLKKDGIAVFLAPVSLLTSKQ
SDLLKQWLKDYADIIAVITLPESIFGNVANAKSIFVLKKQAAQTPETFVYPLSDLQSRETLTDFIGKFQKWKVDNMNFKK
NVI
MNFEKIETAYELILENIQLIENELKTHIYDALIEQNSFYLGAEGASEEVAANNEKLRQLALTKEEWRRAFQFIFIKAGQT
EQLQANHQFTPDAIGFILLFLIENLTDSDKIDLLEIGSGTGNLAQTFLNNSSKELNYLGIEVDDLLIDLSASIAEVMDSD
ARFIQEDAVRPQILQESDVIISDLPVGFYPNDDIAKRYKVASSDEHTYAHHLLMEQSLKYLKKDGIAVFLAPVSLLTSKQ
SDLLKQWLKDYADIIAVITLPESIFGNVANAKSIFVLKKQAAQTPETFVYPLSDLQSRETLTDFIGKFQKWKVDNMNFKK
NVI
Nucleotide
Download Length: 972 bp
>NTDB_id=109591 ACGHT2_RS00775 WP_117479470.1 113411..114382(+) (comYH) [Streptococcus pasteurianus strain k46-0107-A9]
ATGAATTTTGAAAAAATTGAAACAGCCTATGAGCTGATTTTAGAAAATATCCAATTAATTGAAAATGAGTTAAAAACTCA
TATTTATGATGCGCTTATTGAACAGAACTCTTTTTACTTGGGTGCTGAAGGTGCCAGTGAAGAAGTTGCTGCCAACAATG
AGAAACTGCGTCAGCTTGCATTGACCAAAGAAGAGTGGCGTCGAGCTTTCCAATTTATCTTTATCAAAGCTGGTCAAACA
GAGCAACTGCAAGCCAATCATCAATTTACACCAGATGCTATTGGTTTTATTTTGCTGTTCTTGATTGAAAATCTGACAGA
TTCAGATAAAATTGACCTTTTAGAAATTGGTAGTGGGACAGGGAACCTTGCTCAAACATTCTTAAATAATTCGTCTAAAG
AATTAAATTATCTTGGTATTGAAGTTGACGATTTGTTGATTGATTTATCAGCAAGTATTGCAGAAGTGATGGATTCTGAT
GCTCGGTTTATTCAAGAAGACGCTGTGCGTCCACAAATTCTACAAGAAAGTGATGTGATTATTAGTGATTTGCCAGTGGG
TTTCTATCCTAATGATGACATTGCAAAACGTTATAAAGTGGCAAGTTCTGATGAGCATACCTATGCCCACCATTTGTTAA
TGGAACAATCGTTAAAATATCTCAAAAAAGATGGTATTGCAGTCTTTTTGGCGCCCGTTAGTCTTTTGACAAGCAAACAG
AGTGATTTATTGAAACAATGGTTGAAAGATTACGCGGATATTATCGCCGTGATTACTTTGCCAGAATCTATTTTTGGCAA
TGTAGCGAATGCGAAATCAATTTTTGTTTTGAAAAAACAGGCTGCGCAGACGCCAGAAACCTTTGTTTATCCACTTTCTG
ACTTACAAAGTCGTGAAACTCTGACCGATTTCATTGGAAAATTTCAAAAATGGAAAGTTGATAATATGAATTTTAAAAAA
AATGTGATATAA
ATGAATTTTGAAAAAATTGAAACAGCCTATGAGCTGATTTTAGAAAATATCCAATTAATTGAAAATGAGTTAAAAACTCA
TATTTATGATGCGCTTATTGAACAGAACTCTTTTTACTTGGGTGCTGAAGGTGCCAGTGAAGAAGTTGCTGCCAACAATG
AGAAACTGCGTCAGCTTGCATTGACCAAAGAAGAGTGGCGTCGAGCTTTCCAATTTATCTTTATCAAAGCTGGTCAAACA
GAGCAACTGCAAGCCAATCATCAATTTACACCAGATGCTATTGGTTTTATTTTGCTGTTCTTGATTGAAAATCTGACAGA
TTCAGATAAAATTGACCTTTTAGAAATTGGTAGTGGGACAGGGAACCTTGCTCAAACATTCTTAAATAATTCGTCTAAAG
AATTAAATTATCTTGGTATTGAAGTTGACGATTTGTTGATTGATTTATCAGCAAGTATTGCAGAAGTGATGGATTCTGAT
GCTCGGTTTATTCAAGAAGACGCTGTGCGTCCACAAATTCTACAAGAAAGTGATGTGATTATTAGTGATTTGCCAGTGGG
TTTCTATCCTAATGATGACATTGCAAAACGTTATAAAGTGGCAAGTTCTGATGAGCATACCTATGCCCACCATTTGTTAA
TGGAACAATCGTTAAAATATCTCAAAAAAGATGGTATTGCAGTCTTTTTGGCGCCCGTTAGTCTTTTGACAAGCAAACAG
AGTGATTTATTGAAACAATGGTTGAAAGATTACGCGGATATTATCGCCGTGATTACTTTGCCAGAATCTATTTTTGGCAA
TGTAGCGAATGCGAAATCAATTTTTGTTTTGAAAAAACAGGCTGCGCAGACGCCAGAAACCTTTGTTTATCCACTTTCTG
ACTTACAAAGTCGTGAAACTCTGACCGATTTCATTGGAAAATTTCAAAAATGGAAAGTTGATAATATGAATTTTAAAAAA
AATGTGATATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
68.987 |
97.833 |
0.675 |
| comYH | Streptococcus mutans UA159 |
68.671 |
97.833 |
0.672 |