Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | ACMVYQ_RS07265 | Genome accession | NZ_CP180345 |
| Coordinates | 1399863..1400837 (+) | Length | 324 a.a. |
| NCBI ID | WP_002453334.1 | Uniprot ID | - |
| Organism | Staphylococcus capitis strain YSMAA1_1_H3st | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1394863..1405837
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACMVYQ_RS07230 (ACMVYQ_07230) | rpmG | 1395377..1395526 (+) | 150 | WP_002433802.1 | 50S ribosomal protein L33 | - |
| ACMVYQ_RS07235 (ACMVYQ_07235) | - | 1395675..1396226 (+) | 552 | WP_029625710.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| ACMVYQ_RS07240 (ACMVYQ_07240) | - | 1396227..1397689 (+) | 1463 | Protein_1347 | rhomboid family intramembrane serine protease | - |
| ACMVYQ_RS07245 (ACMVYQ_07245) | - | 1397670..1397873 (+) | 204 | WP_002453337.1 | YqgQ family protein | - |
| ACMVYQ_RS07250 (ACMVYQ_07250) | - | 1397870..1398856 (+) | 987 | WP_002453336.1 | ROK family glucokinase | - |
| ACMVYQ_RS07255 (ACMVYQ_07255) | - | 1398856..1399182 (+) | 327 | WP_002433945.1 | MTH1187 family thiamine-binding protein | - |
| ACMVYQ_RS07260 (ACMVYQ_07260) | - | 1399182..1399805 (+) | 624 | WP_002453335.1 | MBL fold metallo-hydrolase | - |
| ACMVYQ_RS07265 (ACMVYQ_07265) | comGA | 1399863..1400837 (+) | 975 | WP_002453334.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACMVYQ_RS07270 (ACMVYQ_07270) | comGB | 1400809..1401882 (+) | 1074 | WP_415429053.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ACMVYQ_RS07275 (ACMVYQ_07275) | comGC | 1401901..1402212 (+) | 312 | WP_029625707.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ACMVYQ_RS07280 (ACMVYQ_07280) | comGD | 1402190..1402639 (+) | 450 | WP_121909863.1 | competence type IV pilus minor pilin ComGD | - |
| ACMVYQ_RS07285 (ACMVYQ_07285) | - | 1402626..1402925 (+) | 300 | WP_002453332.1 | hypothetical protein | - |
| ACMVYQ_RS07290 (ACMVYQ_07290) | comGF | 1402843..1403334 (+) | 492 | WP_165766541.1 | competence type IV pilus minor pilin ComGF | - |
| ACMVYQ_RS07295 (ACMVYQ_07295) | - | 1403504..1404013 (+) | 510 | WP_029625706.1 | shikimate kinase | - |
| ACMVYQ_RS07300 (ACMVYQ_07300) | gcvT | 1404222..1405313 (+) | 1092 | WP_016898186.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37118.93 Da Isoelectric Point: 7.7163
>NTDB_id=1095379 ACMVYQ_RS07265 WP_002453334.1 1399863..1400837(+) (comGA) [Staphylococcus capitis strain YSMAA1_1_H3st]
MKMLFQEIVNYAIKHTASDIHFIPTEHHTLIKLRINDQLINYDTLAHAIYKKLLVYMKFKSGLDVSTQQLAQSGRYTYKL
QNMYYLRISTLPLSLGNESCVIRIVPQYFQQRRDSYEFKDFKHLMNKKQGLLLFSGPTGSGKSTLMYQMVMHAYQNLNLN
VISIEDPVEQLLDGITQISVNEKAGINYTNSFKAILRCDPDVILIGEIRDAYIAKCVIQASLSGHLVLTTLHANDCKGAL
LRLLEMGVTVQELCQSINLISNQRLITTQTNTRELVCEVMNQNQVEYFFEHNHELPNSFTKLATHLTNLSKEGVICEEVV
NKYT
MKMLFQEIVNYAIKHTASDIHFIPTEHHTLIKLRINDQLINYDTLAHAIYKKLLVYMKFKSGLDVSTQQLAQSGRYTYKL
QNMYYLRISTLPLSLGNESCVIRIVPQYFQQRRDSYEFKDFKHLMNKKQGLLLFSGPTGSGKSTLMYQMVMHAYQNLNLN
VISIEDPVEQLLDGITQISVNEKAGINYTNSFKAILRCDPDVILIGEIRDAYIAKCVIQASLSGHLVLTTLHANDCKGAL
LRLLEMGVTVQELCQSINLISNQRLITTQTNTRELVCEVMNQNQVEYFFEHNHELPNSFTKLATHLTNLSKEGVICEEVV
NKYT
Nucleotide
Download Length: 975 bp
>NTDB_id=1095379 ACMVYQ_RS07265 WP_002453334.1 1399863..1400837(+) (comGA) [Staphylococcus capitis strain YSMAA1_1_H3st]
ATGAAAATGTTATTCCAAGAGATAGTTAATTATGCTATAAAGCACACTGCAAGTGATATACATTTTATTCCTACTGAGCA
CCATACTTTAATTAAACTAAGAATCAACGATCAACTTATTAATTACGATACACTGGCACATGCTATTTACAAAAAGTTAC
TTGTTTATATGAAGTTCAAATCAGGCTTAGATGTTTCGACCCAACAGCTAGCCCAAAGCGGAAGATATACTTATAAATTG
CAAAATATGTATTACTTAAGAATCTCTACGCTACCTTTATCTTTAGGTAATGAAAGTTGCGTTATAAGAATCGTACCTCA
ATATTTCCAACAAAGACGTGACTCATATGAATTTAAAGATTTTAAGCACTTAATGAATAAAAAACAAGGATTATTACTTT
TTAGTGGTCCAACTGGCTCTGGGAAAAGCACTTTAATGTATCAAATGGTAATGCATGCCTATCAAAATTTAAATTTAAAT
GTTATTTCAATTGAAGATCCTGTTGAGCAATTATTAGATGGGATAACTCAAATTTCAGTTAATGAAAAGGCCGGGATAAA
TTATACTAACTCTTTTAAAGCCATACTTAGATGTGACCCTGATGTCATTTTGATTGGAGAAATTCGTGATGCTTATATTG
CTAAATGTGTTATACAAGCAAGTCTAAGTGGTCATTTAGTGCTTACAACTTTACATGCTAATGATTGTAAAGGGGCTTTA
CTTCGTCTACTAGAAATGGGTGTTACAGTGCAAGAATTATGTCAATCTATAAATTTAATATCTAATCAAAGACTTATCAC
CACACAAACTAATACGCGTGAATTAGTTTGTGAAGTAATGAACCAAAATCAAGTAGAATACTTTTTTGAACACAATCATG
AACTACCAAATAGCTTCACTAAGCTGGCTACACATCTAACTAATCTTTCTAAGGAAGGAGTAATTTGTGAAGAGGTTGTT
AATAAGTATACTTAA
ATGAAAATGTTATTCCAAGAGATAGTTAATTATGCTATAAAGCACACTGCAAGTGATATACATTTTATTCCTACTGAGCA
CCATACTTTAATTAAACTAAGAATCAACGATCAACTTATTAATTACGATACACTGGCACATGCTATTTACAAAAAGTTAC
TTGTTTATATGAAGTTCAAATCAGGCTTAGATGTTTCGACCCAACAGCTAGCCCAAAGCGGAAGATATACTTATAAATTG
CAAAATATGTATTACTTAAGAATCTCTACGCTACCTTTATCTTTAGGTAATGAAAGTTGCGTTATAAGAATCGTACCTCA
ATATTTCCAACAAAGACGTGACTCATATGAATTTAAAGATTTTAAGCACTTAATGAATAAAAAACAAGGATTATTACTTT
TTAGTGGTCCAACTGGCTCTGGGAAAAGCACTTTAATGTATCAAATGGTAATGCATGCCTATCAAAATTTAAATTTAAAT
GTTATTTCAATTGAAGATCCTGTTGAGCAATTATTAGATGGGATAACTCAAATTTCAGTTAATGAAAAGGCCGGGATAAA
TTATACTAACTCTTTTAAAGCCATACTTAGATGTGACCCTGATGTCATTTTGATTGGAGAAATTCGTGATGCTTATATTG
CTAAATGTGTTATACAAGCAAGTCTAAGTGGTCATTTAGTGCTTACAACTTTACATGCTAATGATTGTAAAGGGGCTTTA
CTTCGTCTACTAGAAATGGGTGTTACAGTGCAAGAATTATGTCAATCTATAAATTTAATATCTAATCAAAGACTTATCAC
CACACAAACTAATACGCGTGAATTAGTTTGTGAAGTAATGAACCAAAATCAAGTAGAATACTTTTTTGAACACAATCATG
AACTACCAAATAGCTTCACTAAGCTGGCTACACATCTAACTAATCTTTCTAAGGAAGGAGTAATTTGTGAAGAGGTTGTT
AATAAGTATACTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
70.588 |
99.691 |
0.704 |
| comGA | Staphylococcus aureus N315 |
70.588 |
99.691 |
0.704 |